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Observables function #269

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merged 17 commits into from
Feb 7, 2020
Merged

Observables function #269

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279f550
allow to extract only estimate parameters
yannikschaelte Feb 6, 2020
801eee3
Merge branch 'develop' into fixes_ys
yannikschaelte Feb 6, 2020
3ad1a40
add docstrings
yannikschaelte Feb 6, 2020
29f717c
Merge branch 'develop' into fixes_ys
yannikschaelte Feb 6, 2020
48b9961
return scaled versions of arrays
yannikschaelte Feb 6, 2020
f62b7ad
Update petab/problem.py
yannikschaelte Feb 6, 2020
50512ab
Merge branch 'develop' into fixes_ys
yannikschaelte Feb 6, 2020
e1c7834
Merge branch 'develop' into fixes_ys
yannikschaelte Feb 7, 2020
9766c01
add get_observables function
yannikschaelte Feb 7, 2020
2f8e2bd
add observables test; use observables file in petab test
yannikschaelte Feb 7, 2020
a55a86b
fix typo
yannikschaelte Feb 7, 2020
fff017d
move get_observables to ..._ids
yannikschaelte Feb 7, 2020
79a5d21
remove unused arg
yannikschaelte Feb 7, 2020
b2276fd
add docstring
yannikschaelte Feb 7, 2020
1a41b13
fix lint
yannikschaelte Feb 7, 2020
18dfc99
fix pylint
yannikschaelte Feb 7, 2020
c9f76cb
fix flake8
yannikschaelte Feb 7, 2020
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fix pylint
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@yannikschaelte
yannikschaelte committed Feb 7, 2020
commit 18dfc999b5d4f30797fce295c20e46aa8a3e3913
2 changes: 1 addition & 1 deletion tests/test_petab.py
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Expand Up @@ -361,7 +361,7 @@ def test_concat_measurements():
petab.measurements.get_measurement_df))


def test_get_obervable_ids(petab_problem): # noqa: W0621
def test_get_obervable_ids(petab_problem): #pylint: disable=W0621
"""Test if observable ids functions returns correct value."""
assert set(petab_problem.get_observable_ids()) == set(['observable_1'])

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