[Bug] Handle CC --bare flag (skips hooks, breaks discovery)

[OneStepAt4time]

Problem

CC v2.1.81 added --bare flag that skips hooks, LSP, plugin sync. If a user passes --bare in claudeCommand, our SessionStart hook won't fire and session discovery will never find the CC session ID.

Solution

1. Detect --bare in claudeCommand parameter
2. Fall back to alternative discovery method (e.g., scan for new .jsonl files in the project directory)
3. Warn in logs that hook-based discovery is disabled