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This repository is for a group final project in Computational Biology

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NoahElRimawiFine/COMP561_Project

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COMP561 Project

4 datasets:

chromFa (human genome) wgEncodingRegTfbs...GM12878 (genomic regions which are active regulatory regions in cell GM12878) factorbookMotifPos (genome coordinates for actual transcription factor binding sites for different transcription factors) factorbookMotifPwm (position weight matrices for each transcription factor)

download all 4 datasets, put them in the 'datasets' folder and unzip them.

known issues:

genome_shape dataset is only chr1 (I can only download the first 10 million rows)

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This repository is for a group final project in Computational Biology

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