Revert "remove env from all JJobs"

This reverts commit ef436d9.
NOAA-EMC · WalterKolczynski-NOAA · Jul 27, 2022 · Jul 20, 2022 · Jul 20, 2022 · Jul 20, 2022
commit 3570279e038d75cc1da88ff34a626720e76a8404
diff --git a/jobs/JGDAS_ATMOS_ANALYSIS_DIAG b/jobs/JGDAS_ATMOS_ANALYSIS_DIAG
@@ -59,7 +59,7 @@ export pgmerr=errfile
 export CDATE=${CDATE:-${PDY}${cyc}}
 export CDUMP=${CDUMP:-${RUN:-"gfs"}}
 export COMPONENT=${COMPONENT:-atmos}
-export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"}
+export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"} 
 
 
 ##############################################
@@ -112,6 +112,7 @@ fi
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ATMOS_CHGRES_FORENKF b/jobs/JGDAS_ATMOS_CHGRES_FORENKF
@@ -97,6 +97,7 @@ export COMIN_GES_ENS="$ROTDIR/enkfgdas.$gPDY/$gcyc/$COMPONENT"
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ATMOS_GEMPAK b/jobs/JGDAS_ATMOS_GEMPAK
@@ -73,7 +73,9 @@ fi
 
 export pgmout=OUTPUT.$$
 
-if [ -f $DATA/poescript ]; then
+env
+
+if [ -f $DATA/poescrip ]; then
    rm $DATA/poescript
 fi
 

diff --git a/jobs/JGDAS_ATMOS_GEMPAK_META_NCDC b/jobs/JGDAS_ATMOS_GEMPAK_META_NCDC
@@ -86,6 +86,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ########################################################
 # Execute the script.
 $USHgempak/gdas_meta_na.sh

diff --git a/jobs/JGDAS_EFSOI b/jobs/JGDAS_EFSOI
@@ -97,6 +97,7 @@ mkdir -p $OSENSE_SAVE_DIR
 
 ###############################################################
 # Run relevant exglobal script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_EFSOI_ECEN b/jobs/JGDAS_EFSOI_ECEN
@@ -99,13 +99,14 @@ fi
 
 # COMIN, COMIN_ENS and COMIN_GES_ENS are used in script
 export COMIN="$ROTDIR/$CDUMP.$PDY/$cyc/$COMPONENT"
-export COMIN_ENS="$ROTDIR/efsoi$CDUMP_ENKF.$PDY/$cyc/$COMPONENT"
+export COMIN_ENS="$ROTDIR/efsoi$CDUMP_ENKF.$PDY/$cyc/$COMPONENT" 
 export COMOUT_ENS="$ROTDIR/efsoi$CDUMP.$PDY/$cyc/$COMPONENT"
 export COMIN_GES_ENS="$ROTDIR/enkf$CDUMP.$gPDY/$gcyc/$COMPONENT"
 
 
 ###############################################################
 # Run relevant script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_EFSOI_FCST b/jobs/JGDAS_EFSOI_FCST
@@ -63,7 +63,7 @@ if [ $RUN_ENVIR = "nco" ]; then
 fi
 
 # tells the forecast script to use efsoi ensemble
-export EFSOI_TASK="YES"
+export EFSOI_TASK="YES" 
 
 ##############################################
 # Begin JOB SPECIFIC work
@@ -93,6 +93,7 @@ export ENSBEG=$((ENSEND - NMEM_EFCSGRP + 1))
 
 ###############################################################
 # Run relevant script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_EFSOI_POST b/jobs/JGDAS_EFSOI_POST
@@ -84,6 +84,7 @@ export LEVS=$((LEVS-1))
 
 ###############################################################
 # Run relevant script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_EFSOI_SFC b/jobs/JGDAS_EFSOI_SFC
@@ -118,6 +118,7 @@ export COMIN_GES_ENS="$ROTDIR/enkf$CDUMP.$gPDY/$gcyc/$COMPONENT"
 
 ###############################################################
 # Run relevant script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_EFSOI_UPDATE b/jobs/JGDAS_EFSOI_UPDATE
@@ -92,6 +92,7 @@ mkdir -p $COMOUT_ANL_ENSFSOI
 
 ###############################################################
 # Run relevant exglobal script
+env
 msg="HAS BEGUN on `hostname`"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGDAS_ENKF_DIAG b/jobs/JGDAS_ENKF_DIAG
@@ -147,6 +147,7 @@ done
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ENKF_ECEN b/jobs/JGDAS_ENKF_ECEN
@@ -103,6 +103,7 @@ export COMIN_GES_ENS="$ROTDIR/enkf$CDUMP.$gPDY/$gcyc/$COMPONENT"
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ENKF_FCST b/jobs/JGDAS_ENKF_FCST
@@ -83,6 +83,7 @@ export ENSBEG=$((ENSEND - NMEM_EFCSGRP + 1))
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ENKF_POST b/jobs/JGDAS_ENKF_POST
@@ -77,6 +77,7 @@ export LEVS=$((LEVS-1))
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ENKF_SELECT_OBS b/jobs/JGDAS_ENKF_SELECT_OBS
@@ -149,6 +149,7 @@ done
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGDAS_ENKF_SFC b/jobs/JGDAS_ENKF_SFC
@@ -104,6 +104,7 @@ export COMIN_GES_ENS="$ROTDIR/enkf$CDUMP.$gPDY/$gcyc/$COMPONENT"
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGFS_ATMOS_AWIPS_20KM_1P0DEG b/jobs/JGFS_ATMOS_AWIPS_20KM_1P0DEG
@@ -62,6 +62,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ########################################################
 # Execute the script.
 #   Forecast hours from F00 - F84  at 3-hour interval

diff --git a/jobs/JGFS_ATMOS_AWIPS_G2 b/jobs/JGFS_ATMOS_AWIPS_G2
@@ -63,6 +63,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ########################################################
 # Execute the script.
 #########################################################

diff --git a/jobs/JGFS_ATMOS_CYCLONE_GENESIS b/jobs/JGFS_ATMOS_CYCLONE_GENESIS
@@ -109,6 +109,7 @@ mkdir -m 775 -p $COMOUTgenvit
 ##############################################
 # Run relevant script
 ##############################################
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

@@ -115,6 +115,7 @@ fi
 ##############################################
 # Run relevant script
 ##############################################
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGFS_ATMOS_FBWIND b/jobs/JGFS_ATMOS_FBWIND
@@ -62,6 +62,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ########################################################
 # Execute the script.
 $HOMEgfs/scripts/exgfs_atmos_fbwind.sh

diff --git a/jobs/JGFS_ATMOS_FSU_GENESIS b/jobs/JGFS_ATMOS_FSU_GENESIS
@@ -110,7 +110,7 @@ if [ $RUN_ENVIR = "nco" ]; then
     export COMOUTatcf=${COMROOTp1:?}/nhc/${envir}/atcf
     mkdir -m 775 -p $COMOUThur $COMOUTatcf
 else
-#    export COMOUThur=$COMOUT
+#    export COMOUThur=$COMOUT         
 #    export COMOUTatcf=$COMOUT
     export COMOUThur=$DATA
     export COMOUTatcf=$DATA
@@ -119,6 +119,7 @@ fi
 ##############################################
 # Run relevant script
 ##############################################
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGFS_ATMOS_GEMPAK b/jobs/JGFS_ATMOS_GEMPAK
@@ -73,6 +73,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 rm -f poescript
 
 #################################################################

diff --git a/jobs/JGFS_ATMOS_GEMPAK_META b/jobs/JGFS_ATMOS_GEMPAK_META
@@ -92,6 +92,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ########################################################
 # Execute the script.
 $SRCgfs/exgfs_atmos_gempak_meta.sh

diff --git a/jobs/JGFS_ATMOS_GEMPAK_NCDC_UPAPGIF b/jobs/JGFS_ATMOS_GEMPAK_NCDC_UPAPGIF
@@ -84,6 +84,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 msg="Begin job for $job"
 postmsg "$jlogfile" "$msg"
 

diff --git a/jobs/JGFS_ATMOS_GEMPAK_PGRB2_SPEC b/jobs/JGFS_ATMOS_GEMPAK_PGRB2_SPEC
@@ -63,6 +63,8 @@ if [ $SENDCOM = YES ] ; then
   mkdir -m 775 -p $COMOUT
 fi
 
+env
+
 export DATA_HOLD=$DATA
 
 msg="Begin job for $job"

diff --git a/jobs/JGFS_ATMOS_PGRB2_SPEC_NPOESS b/jobs/JGFS_ATMOS_PGRB2_SPEC_NPOESS
@@ -65,6 +65,8 @@ fi
 
 export pgmout=OUTPUT.$$
 
+env
+
 ####################################
 # Specify Forecast Hour Range
 ####################################

diff --git a/jobs/JGFS_ATMOS_POSTSND b/jobs/JGFS_ATMOS_POSTSND
@@ -92,6 +92,8 @@ export DBNROOT=${DBNROOT:-${UTILROOT}/fakedbn}
 [[ ! -d $pcom ]] && mkdir -p $pcom
 [[ ! -d $COMAWP ]] && mkdir -p $COMAWP
 
+env
+
 ########################################################
 # Execute the script.
 $SCRbufrsnd/exgfs_atmos_postsnd.sh

diff --git a/jobs/JGLOBAL_ATMOS_ANALYSIS b/jobs/JGLOBAL_ATMOS_ANALYSIS
@@ -59,7 +59,7 @@ export pgmerr=errfile
 export CDATE=${CDATE:-${PDY}${cyc}}
 export CDUMP=${CDUMP:-${RUN:-"gfs"}}
 export COMPONENT=${COMPONENT:-atmos}
-export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"}
+export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"} 
 
 
 ##############################################
@@ -103,7 +103,7 @@ fi
 
 # Get LEVS
 if [ ${GSUFFIX} = ".nc" ]; then
-    export LEVS=$($NCLEN $ATMGES pfull)
+    export LEVS=$($NCLEN $ATMGES pfull) 
     status=$?
 else
     export LEVS=$($NEMSIOGET $ATMGES dimz | awk '{print $2}')
@@ -140,6 +140,7 @@ fi
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGLOBAL_ATMOS_ANALYSIS_CALC b/jobs/JGLOBAL_ATMOS_ANALYSIS_CALC
@@ -59,7 +59,7 @@ export pgmerr=errfile
 export CDATE=${CDATE:-${PDY}${cyc}}
 export CDUMP=${CDUMP:-${RUN:-"gfs"}}
 export COMPONENT=${COMPONENT:-atmos}
-export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"}
+export DO_CALC_ANALYSIS=${DO_CALC_ANALYSIS:-"YES"} 
 
 
 ##############################################
@@ -103,7 +103,7 @@ fi
 
 # Get LEVS
 if [ ${GSUFFIX} = ".nc" ]; then
-    export LEVS=$($NCLEN $ATMGES pfull)
+    export LEVS=$($NCLEN $ATMGES pfull) 
     status=$?
 else
     export LEVS=$($NEMSIOGET $ATMGES dimz | awk '{print $2}')
@@ -127,6 +127,7 @@ export DOGAUSFCANL=${DOGAUSFCANL:-"YES"}
 
 ###############################################################
 # Run relevant script
+env
 echo "HAS BEGUN on $(hostname)"
 $LOGSCRIPT
 

diff --git a/jobs/JGLOBAL_ATMOS_EMCSFC_SFC_PREP b/jobs/JGLOBAL_ATMOS_EMCSFC_SFC_PREP
@@ -59,7 +59,7 @@ export COMPONENT=${COMPONENT:-atmos}
 export COMOUT=${COMOUT:-${COMROOT}/$NET/$envir/$RUN.$PDY/$cyc/$COMPONENT}
 
 export COMINgfs=${COMINgfs:-$(compath.py $NET/$envir/$RUN.$PDY)/$cyc/$COMPONENT}
-export COMINgfs_m6hrs=${COMINgfs_m6hrs:-$(compath.py $NET/$envir/$RUN.$PDY_m6hrs)/$cyc_m6hrs/$COMPONENT}
+export COMINgfs_m6hrs=${COMINgfs_m6hrs:-$(compath.py $NET/$envir/$RUN.$PDY_m6hrs)/$cyc_m6hrs/$COMPONENT} 
 
 export IMS_FILE=${COMINgfs}/${RUN}.${cycle}.imssnow96.grib2
 export FIVE_MIN_ICE_FILE=${COMINgfs}/${RUN}.${cycle}.seaice.5min.grib2
@@ -72,6 +72,8 @@ export BLENDED_ICE_FILE_m6hrs=${BLENDED_ICE_FILE_m6hrs:-${COMINgfs_m6hrs}/${RUN}
 ###############################################################
 # Run relevant script
 ###############################################################
+
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 

diff --git a/jobs/JGLOBAL_ATMOS_NCEPPOST b/jobs/JGLOBAL_ATMOS_NCEPPOST
@@ -118,6 +118,7 @@ export SLEEP_INT=5
 
 ###############################################################
 # Run relevant exglobal script
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGLOBAL_ATMOS_POST_MANAGER b/jobs/JGLOBAL_ATMOS_POST_MANAGER
@@ -33,7 +33,7 @@ set -xue
 # #### 07/30/1999 ###################
 # SET SHELL PROCESSING VARIABLES
 # ###################################
-export PS4='$SECONDS + '
+export PS4='$SECONDS + ' 
 date
 
 ####################################
@@ -43,13 +43,13 @@ export NET=${NET:-gfs}
 export RUN=${RUN:-gfs}
 export COMPONENT=${COMPONENT:-atmos}
 
-####################################
+#################################### 
 # obtain unique process id (pid) and make temp directories
 ####################################
 export pid=${pid:-$$}
 export DATA=${DATA:-${DATAROOT}/${jobid:?}}
 mkdir $DATA
-cd $DATA
+cd $DATA 
 
 ####################################
 # Determine Job Output Name on System

diff --git a/jobs/JGLOBAL_ATMOS_TROPCY_QC_RELOC b/jobs/JGLOBAL_ATMOS_TROPCY_QC_RELOC
@@ -75,7 +75,7 @@ export tmmark=tm00
 if [ $RUN_ENVIR = "nco" ]; then
     export ARCHSYND=$COMROOTp3/gfs/${envir}/syndat     # this location is unique, do not change
 else
-    export ARCHSYND=${ROTDIR}/syndat
+    export ARCHSYND=${ROTDIR}/syndat   
 fi
 if [ ! -d ${ARCHSYND} ]; then mkdir -p $ARCHSYND; fi
 
@@ -104,6 +104,7 @@ export BKGFREQ=1                                # for hourly relocation
 ##############################################
 # Run relevant script
 ##############################################
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT

diff --git a/jobs/JGLOBAL_FORECAST b/jobs/JGLOBAL_FORECAST
@@ -135,6 +135,7 @@ fi
 
 ###############################################################
 # Run relevant exglobal script
+env
 msg="HAS BEGUN on $(hostname)"
 postmsg "$jlogfile" "$msg"
 $LOGSCRIPT
-Original file line number
+Diff line change
@@ Expand Up / @@ -73,6 +73,8 @@ fi @@
     export pgmout=OUTPUT.$$
+    env
     rm -f poescript
     #################################################################
@@ Expand Down @@