Add Jobs and Scripts for JEDI-Based Aerosol DA

[CoryMartin-NOAA]

Description
To support global aerosol initialization for future GEFS/GFS implementations, we need to add to global-workflow jobs and scripts similar to what have already been created for JEDI-based atmospheric variational DA, but for a separate, aerosol analysis.

Requirements
See #981 but I think we need 3 new jobs/scripts:

• aeroanalprep
• aeroanalrun
• aeroanalpost

The prep job should:

• convert netCDF VIIRS AOD obs to IODA format using python/compiled code
• stage backgrounds, fix files, and all other things necessary to run an aerosol analysis.

Run job:

• create YAML file from template(s)
• Run fv3jedi_var.x

Post job:

• archive diagnostic files
• move/copy increments/analysis files and make changes as needed to stage for model initialization

Acceptance Criteria (Definition of Done)
A 'dummy' cycling system is able to run with Aerosol DA tasks included.

Dependencies
This will depend on #981 before testing/debugging can properly occur

[CoryMartin-NOAA]

after discussion with @aerorahul these jobs will be tentatively named:

• aeroanalinit
• aeroanalrun
• aeroanalfinal

[CoryMartin-NOAA]

From @andytangborn

Inputs:

Static:

• Geometry (Nx, Ny, akbk, fv3files, layout, fmsmpp.nml, field_table_gfdl, gfs-aerosol.yaml
• CRTM (VIIRS SpcCoeff.bin and TauCoeff.bin files)
• BUMP files:
  • Correlation files (*.cor_rh.fv_core.res.nc, *.cor_rh.fv_tracer.res.nc, *.cor_rh.coupler.res)
  • StdDev files (*.stddev.fv_core.res.nc, *.stddev.fv_tracer.res.nc, *.stddev.coupler.res)
  • nicas files (nicas_aero_nicas_local_*, 384 files!)

Dynamic

• Background files (*.fv_core.res.nc, *.fv_tracer.res.nc, *.coupler.res)
• Obs files (viirs_n20, viirs_npp)

Outputs:

• hofx
• analysis