ModelDBRepository/183015
Folders and files
| Name | Name | Last commit date | ||
|---|---|---|---|---|
Repository files navigation
<html><pre>
This archive contains NEURON code associated with:
McDougal, R. A., Hines, M. L., & Lytton, W. W. (2013). Reaction-diffusion
in the NEURON simulator. Frontiers in neuroinformatics, 7.
These model files were supplied by Robert A. McDougal.
Files:
bistablewave.py -- The code for the model of Figure 1. The graph in that figure
was made with NEURON's GUI controls.
bistablewave-full-infrastructure.py -- An expanded version of bistablewave.py,
with code for storing state values,
plotting, and more courtesy of Alexandra
Seidenstein.
README.html -- this file
speed.py -- Generates an approximation of Figure 6. Use more alpha values to
match the figure exactly.
Usage:
-----
Running
nrngui bistablewave-full-infrastructure.py
in less than a minute will produce graphs like these:
<img src="./figure_1.png" alt="figure 1" width="550">
<img src="./figure_2.png" alt="figure 2" width="550">
Running
nrngui speed.py
in a minute or so will generate the following figure:
<img src="./speed.png" alt="Speed fig" width="550">
</pre></html>