A collection of different scripts written and used at Micron Oxford They vary widely by application and the organization of the repository is a bit loose, so make sure you check all the subdirectories.
If this repository looks a bit empty, or if the scripts look too simple, that is a good thing. We aim to implement the things we need in other bigger projects, thus being useful for a larger group of people. It also means that it's much easier for others to find and install our work since the other projects will already have distribution methods (and are packaged by many Linux distributions).
Note that each script may be written on its own language and be dependent on external libraries and/or applications such as BioPerl.