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MAINT: remove _id- from brain mask filename generated by DL method
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sebastientourbier authored Oct 20, 2020
1 parent d23c6a6 commit 0956e0d
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion pymialsrtk/pipelines/anatomical/srr.py
Original file line number Diff line number Diff line change
Expand Up @@ -367,7 +367,7 @@ def create_workflow(self):
' ---> ',
sub_ses+'_run-'+str(stack)+'_id-'+str(self.srID)+'_desc-brain_mask.nii.gz')
substitutions.append((sub_ses+'_run-'+str(stack)+'_T2w_brainMask.nii.gz',
sub_ses+'_run-'+str(stack)+'_id-'+str(self.srID)+'_desc-brain_mask.nii.gz'))
sub_ses+'_run-'+str(stack)+'_desc-brain_mask.nii.gz'))

print(sub_ses+'_run-'+str(stack)+'_T2w_nlm_uni_bcorr_histnorm.nii.gz',
' ---> ',
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