Chai-1, SOTA model for biomolecular structure prediction

Refine high-quality datasets and visual AI models

MAGinator - Accurate SNV calling and profiling of MAGs

Contrastive learning of protein representations with graph neural networks for structural and functional annotations

A browser extension that deletes your news feed and replaces it with a nice quote

Predict the structure of immune receptor proteins

A comprehensive library for computational molecular biology

Fuz is a blazingly fast text, file and folder search tool

A shell parser, formatter, and interpreter with bash support; includes shfmt

add statistical significance annotations on seaborn plots. Further development of statannot, with bugfixes, new features, and a different API.

NetSurfP 3.0: Protein secondary structure and relative solvent accessibility prediction

AbLang: A language model for antibodies

Positive and unlabeled learning wrappers for scikit-learn

Command-line program for reading, writing, analyzing, and manipulating sequence files

PREDICTION OF EPITOPES USING ALPHAFOLD2 STRUCTURES AND GRAPH NEURAL NETWORKS

Exercises and supplementary material for the machine learning operations course at DTU.

A collection of inspiring lists, manuals, cheatsheets, blogs, hacks, one-liners, cli/web tools and more.

CLI file system navigation. (Like z and/or autojump)

Spring Boot web application vulnerable to Log4Shell (CVE-2021-44228).

Exercises and supplementary material for the deep learning course 02456 using PyTorch.

Improved metagenome binning using transformers

Biological data-science Jupyter notebooks designed for biodatascience101.github.io

Pytorch implementation of Robust Bi-Tempered Logistic Loss Based on Bregman Divergences