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Fix atmosphere mpas_timekeeping dependencies #582

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@MiCurry MiCurry commented Jun 1, 2020

In preparation for some changes to the mpas_timekeeping module, this merge cleans up use statements in the atmosphere core that wrongly included mpas_timekeeping_types from the mpas_timekeeping module and not the mpas_derived_types module.

The `use` statements in diagnostics/soundings.F and
dynamics/mpas_atm_time_integration.F assumed mpas_timekeeping types were
defined in framework/mpas_timekeeping.F, but they are defined in the
mpas_derived_types module. This does not cause a problem at this present
commit, but could if the mpas_timekpeeing module became private (which is
currently being planned).

This commit corrects the above by including the mpas_timekeeping types from the
mpas_derived_types module.
@MiCurry MiCurry force-pushed the atmosphere/fix_timekeeping_imports branch from fd913de to 6c58629 Compare June 3, 2020 16:23
@mgduda mgduda self-requested a review June 3, 2020 21:53
@mgduda mgduda merged commit b6cb097 into MPAS-Dev:develop Jun 3, 2020
@MiCurry MiCurry deleted the atmosphere/fix_timekeeping_imports branch July 27, 2020 16:56
jonbob added a commit to E3SM-Project/E3SM that referenced this pull request Jul 27, 2020
#3737)

Update MPAS framework

This PR brings in a new mpas-source submodule with updates to the mpas framework
itself, plus changes to the cores supporting the framework update. Some changes
are made to the atmosphere core, even though it is not used by E3SM, in order to
maintain consistency with the framework. This update includes the following
individual branches and PRs, many of which are additions to the makefiles for
summit, or optional libraries:
* az/azamat/mpas-cmake/mpas-tool-dir  (MPAS-Dev/MPAS-Model#629)
* init_atmosphere/kd_tree_ties  (MPAS-Dev/MPAS-Model#630)
* mark-petersen/framework/add_FillValue  (MPAS-Dev/MPAS-Model#616)
* mark-petersen/framework/add_lapack_option  (MPAS-Dev/MPAS-Model#613)
* amametjanov/framework/nullify-field-pointers  (MPAS-Dev/MPAS-Model#578)
* framework/makefile_e3sm  (MPAS-Dev/MPAS-Model#603)
* xylar/framework/make_shell_bash  (MPAS-Dev/MPAS-Model#594)
* registry/missing_value  (MPAS-Dev/MPAS-Model#562)
* pwolfram/updates_make_intel_stack  (MPAS-Dev/MPAS-Model#592)
* azamat/framework/pgi-cpr-omp-workaround  (MPAS-Dev/MPAS-Model#449)
* az/framework/e3sm-cmake-qnosmp-typo  (MPAS-Dev/MPAS-Model#579)
* xylar/compass/add_prerequisite_tag
* atmosphere/fix_timekeeping_imports (MPAS-Dev/MPAS-Model#582)
* xylar/fix_docs_ci  (MPAS-Dev/MPAS-Model#575)
* xylar/add_compass_docs  (MPAS-Dev/MPAS-Model#472)
* philipwjones/framework/summitmake  (MPAS-Dev/MPAS-Model#536)
* atmosphere/atm_core_cleanup  (MPAS-Dev/MPAS-Model#548)
* init_atmosphere/parse_geoindex  (MPAS-Dev/MPAS-Model#459)
* xylar/compass/add_copy_file  (MPAS-Dev/MPAS-Model#467)
* init_atmosphere/kd_tree  (MPAS-Dev/MPAS-Model#438)
* init_atmosphere/mpas_stack  (MPAS-Dev/MPAS-Model#426)
* operators/add_mpas_in_cell  (MPAS-Dev/MPAS-Model#400)

Fixes #3396
Fixes #3236

[BFB]
jonbob added a commit to E3SM-Project/E3SM that referenced this pull request Jul 29, 2020
Update MPAS framework

This PR brings in a new mpas-source submodule with updates to the mpas framework
itself, plus changes to the cores supporting the framework update. Some changes
are made to the atmosphere core, even though it is not used by E3SM, in order to
maintain consistency with the framework. This update includes the following
individual branches and PRs, many of which are additions to the makefiles for
summit, or optional libraries:
* az/azamat/mpas-cmake/mpas-tool-dir  (MPAS-Dev/MPAS-Model#629)
* init_atmosphere/kd_tree_ties  (MPAS-Dev/MPAS-Model#630)
* mark-petersen/framework/add_FillValue  (MPAS-Dev/MPAS-Model#616)
* mark-petersen/framework/add_lapack_option  (MPAS-Dev/MPAS-Model#613)
* amametjanov/framework/nullify-field-pointers  (MPAS-Dev/MPAS-Model#578)
* framework/makefile_e3sm  (MPAS-Dev/MPAS-Model#603)
* xylar/framework/make_shell_bash  (MPAS-Dev/MPAS-Model#594)
* registry/missing_value  (MPAS-Dev/MPAS-Model#562)
* pwolfram/updates_make_intel_stack  (MPAS-Dev/MPAS-Model#592)
* azamat/framework/pgi-cpr-omp-workaround  (MPAS-Dev/MPAS-Model#449)
* az/framework/e3sm-cmake-qnosmp-typo  (MPAS-Dev/MPAS-Model#579)
* xylar/compass/add_prerequisite_tag
* atmosphere/fix_timekeeping_imports (MPAS-Dev/MPAS-Model#582)
* xylar/fix_docs_ci  (MPAS-Dev/MPAS-Model#575)
* xylar/add_compass_docs  (MPAS-Dev/MPAS-Model#472)
* philipwjones/framework/summitmake  (MPAS-Dev/MPAS-Model#536)
* atmosphere/atm_core_cleanup  (MPAS-Dev/MPAS-Model#548)
* init_atmosphere/parse_geoindex  (MPAS-Dev/MPAS-Model#459)
* xylar/compass/add_copy_file  (MPAS-Dev/MPAS-Model#467)
* init_atmosphere/kd_tree  (MPAS-Dev/MPAS-Model#438)
* init_atmosphere/mpas_stack  (MPAS-Dev/MPAS-Model#426)
* operators/add_mpas_in_cell  (MPAS-Dev/MPAS-Model#400)

Fixes #3396
Fixes #3236

[BFB]
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