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  1. aligater aligater Public

    AliGater is a flow cytometry analysis framework for creating automated gating solutions.

    Python 3 1

  2. tsimchr tsimchr Public

    C++

  3. tsimchr_dependencies tsimchr_dependencies Public

    Simulation code

    C++

  4. HSPC-regulators-in-human-blood HSPC-regulators-in-human-blood Public

    AliGater gating strategy scripts for the paper "Genome-wide association study on 13,167 individuals identifies regulators of hematopoietic stem and progenitor cell levels in human blood"

    Python

  5. AliGater-documentation AliGater-documentation Public

    Documenation for the AliGater gating framework

    Jupyter Notebook

  6. interactive_manhattan interactive_manhattan Public

    Python script to generate interactive bokeh manhattans that opens UCSC browser at the snp location

    Python