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Bugfix for empty preds or target in iou scores #5056

Bugfix for empty preds or target in iou scores

Bugfix for empty preds or target in iou scores #5056

Workflow file for this run

name: "CI testing | CPU"
# see: https://help.github.com/en/actions/reference/events-that-trigger-workflows
on: # Trigger the workflow on push or pull request, but only for the master branch
push:
branches: [master, "release/*"]
pull_request:
branches: [master, "release/*"]
types: [opened, reopened, ready_for_review, synchronize]
workflow_dispatch: {}
schedule:
# At the end of every day
- cron: "0 0 * * *"
concurrency:
group: ${{ github.workflow }}-${{ github.ref }}-${{ github.head_ref }}
cancel-in-progress: ${{ ! (github.ref == 'refs/heads/master' || startsWith(github.ref, 'refs/heads/release/')) }}
defaults:
run:
shell: bash
jobs:
check-diff:
if: github.event.pull_request.draft == false
uses: ./.github/workflows/_focus-diff.yml
pytester:
runs-on: ${{ matrix.os }}
needs: check-diff
strategy:
fail-fast: false
matrix:
os: ["ubuntu-22.04"]
python-version: ["3.10"]
pytorch-version:
- "2.0.1"
- "2.1.2"
- "2.2.2"
- "2.3.1"
- "2.4.1"
- "2.5.0"
include:
# cover additional python and PT combinations
- { os: "ubuntu-20.04", python-version: "3.8", pytorch-version: "2.0.1", requires: "oldest" }
- { os: "ubuntu-22.04", python-version: "3.11", pytorch-version: "2.4.1" }
- { os: "ubuntu-22.04", python-version: "3.12", pytorch-version: "2.5.0" }
# standard mac machine, not the M1
- { os: "macOS-13", python-version: "3.10", pytorch-version: "2.0.1" }
# using the ARM based M1 machine
- { os: "macOS-14", python-version: "3.10", pytorch-version: "2.0.1" }
- { os: "macOS-14", python-version: "3.12", pytorch-version: "2.5.0" }
# some windows
- { os: "windows-2022", python-version: "3.10", pytorch-version: "2.0.1" }
- { os: "windows-2022", python-version: "3.12", pytorch-version: "2.5.0" }
# Future released version
#- { os: "ubuntu-22.04", python-version: "3.11", pytorch-version: "2.5.0" }
#- { os: "macOS-14", python-version: "3.11", pytorch-version: "2.5.0" }
#- { os: "windows-2022", python-version: "3.11", pytorch-version: "2.5.0" }
env:
FREEZE_REQUIREMENTS: ${{ ! (github.ref == 'refs/heads/master' || startsWith(github.ref, 'refs/heads/release/')) }}
PYPI_CACHE_DIR: "_ci-cache_PyPI"
TOKENIZERS_PARALLELISM: false
TEST_DIRS: ${{ needs.check-diff.outputs.test-dirs }}
PIP_EXTRA_INDEX_URL: "--find-links https://download.pytorch.org/whl/cpu/torch_stable.html"
# Timeout: https://stackoverflow.com/a/59076067/4521646
# seems that macOS jobs take much more than orger OS
timeout-minutes: 120
steps:
- uses: actions/checkout@v4
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v5
with:
python-version: ${{ matrix.python-version }}
# GitHub Actions: Run step on specific OS: https://stackoverflow.com/a/57948488/4521646
- name: Setup macOS
if: ${{ runner.os == 'macOS' }}
run: |
echo 'UNITTEST_TIMEOUT=--timeout=75' >> $GITHUB_ENV
brew install mecab # https://github.com/coqui-ai/TTS/issues/1533#issuecomment-1338662303
brew install gcc libomp ffmpeg # https://github.com/pytorch/pytorch/issues/20030
- name: Setup Linux
if: ${{ runner.os == 'Linux' }}
run: |
echo 'UNITTEST_TIMEOUT=--timeout=75' >> $GITHUB_ENV
sudo apt update --fix-missing
sudo apt install -y ffmpeg
- name: Setup Windows
if: ${{ runner.os == 'windows' }}
run: choco install ffmpeg
- name: source cashing
uses: ./.github/actions/pull-caches
with:
requires: ${{ matrix.requires }}
pytorch-version: ${{ matrix.pytorch-version }}
pypi-dir: ${{ env.PYPI_CACHE_DIR }}
#- name: Switch to PT test URL
# if: ${{ matrix.pytorch-version == '2.X.0' }}
# run: echo 'PIP_EXTRA_INDEX_URL=--extra-index-url https://download.pytorch.org/whl/test/cpu/' >> $GITHUB_ENV
- name: Install pkg
timeout-minutes: 25
run: |
pip --version
pip install -e . -U "setuptools==69.5.1" -r requirements/_doctest.txt \
$PIP_EXTRA_INDEX_URL --find-links $PYPI_CACHE_DIR
pip list
- name: DocTests
timeout-minutes: 25
working-directory: ./src
env:
SKIP_SLOW_DOCTEST: 1
# NOTE: run coverage on tests does not propagate failure status for Win, https://github.com/nedbat/coveragepy/issues/1003
run: python -m pytest torchmetrics --reruns 3 --reruns-delay 2
- name: Install all dependencies
run: |
curl https://raw.githubusercontent.com/Lightning-AI/utilities/main/scripts/adjust-torch-versions.py -o adjust-torch-versions.py
pip install -q cython # needed for installing `pycocotools` in latest config
for fpath in `ls requirements/*.txt`; do
python adjust-torch-versions.py $fpath
done
pip install --requirement requirements/_devel.txt -U \
$PIP_EXTRA_INDEX_URL --find-links $PYPI_CACHE_DIR
pip list
- name: set special vars for PR
if: ${{ github.event_name == 'pull_request' }}
run: |
echo 'ALLOW_SKIP_IF_OUT_OF_MEMORY=1' >> $GITHUB_ENV
echo 'ALLOW_SKIP_IF_BAD_CONNECTION=1' >> $GITHUB_ENV
- name: Sanity check
id: info
run: |
python -c "from torch import __version__ as ver; ver = ver.split('+')[0] ; assert ver == '${{ matrix.pytorch-version }}', ver"
python -c 'import torch ; print("TORCH=" + str(torch.__version__))' >> $GITHUB_OUTPUT
- name: Pull testing data from S3
working-directory: ./tests
env:
S3_DATA: "https://pl-public-data.s3.amazonaws.com/metrics/data.zip"
run: |
pip install -q "urllib3>1.0"
# wget is simpler but does not work on Windows
python -c "from urllib.request import urlretrieve ; urlretrieve('$S3_DATA', 'data.zip')"
unzip -o data.zip
ls -l _data/*
- name: Export README tests
run: python -m phmdoctest README.md --outfile tests/unittests/test_readme.py
- name: Unittests common
# skip for PR if there is nothing to test, note that outside PR there is default 'unittests'
if: ${{ env.TEST_DIRS != '' }}
working-directory: ./tests
run: |
python -m pytest \
$TEST_DIRS \
--cov=torchmetrics \
--durations=50 \
--reruns 3 \
--reruns-delay 1 \
-m "not DDP" \
-n auto \
--dist=load \
${{ env.UNITTEST_TIMEOUT }}
- name: Unittests DDP
# skip for PR if there is nothing to test, note that outside PR there is default 'unittests'
if: ${{ env.TEST_DIRS != '' }}
working-directory: ./tests
env:
USE_PYTEST_POOL: "1"
run: |
python -m pytest -v \
$TEST_DIRS \
--cov=torchmetrics \
--durations=50 \
-m DDP \
--reruns 3 \
--reruns-delay 1 \
${{ env.UNITTEST_TIMEOUT }}
- name: Statistics
# skip for PR if there is nothing to test, note that outside PR there is default 'unittests'
if: ${{ env.TEST_DIRS != '' }}
working-directory: ./tests
run: |
coverage xml
coverage report
- name: Upload coverage to Codecov
# skip for PR if there is nothing to test, note that outside PR there is default 'unittests'
if: ${{ env.TEST_DIRS != '' }}
uses: codecov/codecov-action@v4
with:
token: ${{ secrets.CODECOV_TOKEN }}
file: tests/coverage.xml
flags: cpu,${{ runner.os }},python${{ matrix.python-version }},torch${{ steps.info.outputs.TORCH }}
env_vars: OS,PYTHON
name: codecov-umbrella
fail_ci_if_error: false
- name: update cashing
if: github.event_name != 'pull_request'
continue-on-error: true
uses: ./.github/actions/push-caches
with:
pypi-dir: ${{ env.PYPI_CACHE_DIR }}
testing-guardian:
runs-on: ubuntu-latest
needs: pytester
if: always()
steps:
- run: echo "${{ needs.pytester.result }}"
- name: failing...
if: needs.pytester.result == 'failure'
run: exit 1
- name: cancelled or skipped...
if: contains(fromJSON('["cancelled", "skipped"]'), needs.pytester.result)
timeout-minutes: 1
run: sleep 90