RNA_seq_RP

Here you can find the Ribosome profiling data analysis

Name		Name	Last commit message	Last commit date
Latest commit History 32 Commits
.gitignore		.gitignore
01_getData.sh		01_getData.sh
02_fastqc.sh		02_fastqc.sh
03_bowtieIndex.sh		03_bowtieIndex.sh
04_preprocessing.sh		04_preprocessing.sh
05_fastQC_processed.sh		05_fastQC_processed.sh
06_RemoveUndesiredRNA.sh		06_RemoveUndesiredRNA.sh
07_mappingGenome.sh		07_mappingGenome.sh
08_SortBamFiles.sh		08_SortBamFiles.sh
09_featureCounts.sh		09_featureCounts.sh
10_mappingTranscriptome.sh		10_mappingTranscriptome.sh
11_SortBamFiles.sh		11_SortBamFiles.sh
12_Multiqc.sh		12_Multiqc.sh
CodonOccupancy.R		CodonOccupancy.R
Codon_occupancy_cal.sh		Codon_occupancy_cal.sh
DEseq.R		DEseq.R
GeneOntologyAnalysis.R		GeneOntologyAnalysis.R
README.md		README.md
RPF_biotypes.R		RPF_biotypes.R
Ribose_QC1.R		Ribose_QC1.R
featureCounts.R		featureCounts.R

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