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Kaue678/README.md

👋 Hi, I’m @Kaue678

🖥️🧬 Interests

I’m passionate about:

  • Cheminformatics
  • Machine Learning Algorithms
  • Data Science
  • Molecular Modeling Tools

🤝 Collaboration

I’m looking to collaborate on:

  • Peptide Science
  • Molecular Data Analysis using Biocheminformatics
  • Discovery of Druglikeness and ADMET properties
  • Analysis of Protein Catalysis, Allostery, and Inhibition

🛠️ 🔌Technologies & Tools

I work with:

  • Programming Languages: Python and R
  • Programming and Scientific Tools: TensorFlow, Scikit-learn, KNIME, RDKit, Numpy, BioPython, PyBioMed, and R Studio
  • Molecular modeling tools: AutoDock Vina, Amber, Modeller, Gaussian, Sietraj, UCSF Chimera, Avogadro, and FoldX
  • Cheminformatic tools: RDkit, OpenBabel, KNIME, and Osiris Data Warrior

📂 Current Projects

  • Developing tools for analyzing peptide sequences and structures
  • Building models to predict pharmacodynamics, pharmacokinetics, and bioactivity.
  • Investigation of catalysis, inhibition, and allostery of proteins of biotechnological interest

✨ Favorite Quotes

"The important thing is not to stop questioning. Curiosity has its own reason for existing." – Albert Einstein “Almost all aspects of life are engineered at the molecular level” - Francis Crick

📫 How to Reach Me

My Academic Networks


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  1. Cheminformatics-Python Cheminformatics-Python Public

    I developed some cheminformatic scripts in Python using Pandas, SciPy, NumPy, and Scikit-learn to assist in investigating the molecular properties of compounds through multivariate analysis.

    Python 1

  2. Amber_system_solvation Amber_system_solvation Public

    I develop some Python and Shell scripts to analyze MD trajectories

    DIGITAL Command Language 1

  3. Cheminformatics-KNIME Cheminformatics-KNIME Public

    Several KNIME workflows designed to calculate molecular fingerprints and chemical descriptors of compounds, as well as to analyze Murcko scaffolds and the chemical space of molecules

  4. Structural-Bioinformatics Structural-Bioinformatics Public

    Some Python scripts to convert and analyze biological molecular data

    Python

  5. nodes4knime nodes4knime Public

    Forked from cdk/nodes4knime

    KNIMES nodes using the CDK 1.5 library.

    Java 1

  6. BrainPepPass BrainPepPass Public

    Forked from ewerton-cristhian/BrainPepPass

    BrainPepPass: A framework based on supervised dimensionality reduction for predicting blood-brain barrier-penetrating peptides.