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@KatherLab

Kather Lab at EKFZ / TU Dresden

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  1. LLMAIx LLMAIx Public

    Document Information Extraction & Anonymization using local LLMs

    Python 127 19

  2. marugoto marugoto Public

    Tools to build deep learning pipelines.

    Python 112 31

  3. STAMP STAMP Public

    Solid Tumor Associative Modeling in Pathology

    Python 102 46

  4. HIA HIA Public

    Histopathology Image Analysis

    Python 92 17

  5. ToolMaker ToolMaker Public

    Turn GitHub repositories into LLM tools. (ACL 2025)

    Python 58 8

  6. LLMAnonymizer-Publication LLMAnonymizer-Publication Public

    Anonymize Medical Documents using LLMs

    Python 53 9

Repositories

Showing 10 of 66 repositories
  • MediSwarm Public

    MediSwarm is an open-source project for advancing medical deep learning using swarm intelligence and NVFlare. Developed by the Odelia consortium, it ensures data privacy through federated learning, enabling collaborative, decentralized model training across institutions for improved medical research and applications.

    KatherLab/MediSwarm’s past year of commit activity
    Python 12 MIT 2 19 4 Updated Dec 10, 2025
  • swarm-learning-hpe Public

    Experimental repo for Odelia project based on HPE platform. This repo contains multiple models for histopathology and radiology training.

    KatherLab/swarm-learning-hpe’s past year of commit activity
    Jupyter Notebook 12 MIT 2 29 12 Updated Dec 6, 2025
  • STAMP Public

    Solid Tumor Associative Modeling in Pathology

    KatherLab/STAMP’s past year of commit activity
    Python 102 MIT 46 11 3 Updated Dec 4, 2025
  • llmaixweb Public

    A web interface for the LLMAIx framework. Information Extraction.

    KatherLab/llmaixweb’s past year of commit activity
    Vue 10 AGPL-3.0 0 1 10 Updated Nov 24, 2025
  • 3DAnnotationSimSAM2 Public

    SAM 2 - assisted annotation simulation of 3D radiology imaging

    KatherLab/3DAnnotationSimSAM2’s past year of commit activity
    Python 0 Apache-2.0 0 0 0 Updated Nov 10, 2025
  • PathPrism Public
    KatherLab/PathPrism’s past year of commit activity
    Jupyter Notebook 2 0 0 0 Updated Nov 5, 2025
  • llmaixlib Public

    Python library for document preprocessing and information extraction

    KatherLab/llmaixlib’s past year of commit activity
    Python 6 MIT 0 0 5 Updated Oct 27, 2025
  • mopadi Public

    MOrphing histoPAthology DIffusion models for explainability of AI pipelines in medical image analysis.

    KatherLab/mopadi’s past year of commit activity
    Python 10 1 0 0 Updated Oct 21, 2025
  • workspaces Public Forked from LocalToasty/workspaces

    A tool to manage ephemeral data

    KatherLab/workspaces’s past year of commit activity
    Rust 0 GPL-3.0 2 0 0 Updated Oct 15, 2025
  • HepatoSageCT Public Forked from AsierRabasco/HepatoSageCT

    Repository of code for experiments in the paper "Detection of Esophageal Varices and Prediction of Liver Decompensation in Unresectable Hepatocellular Carcinoma using Artificial Intelligence"

    KatherLab/HepatoSageCT’s past year of commit activity
    Python 0 MIT 1 0 0 Updated Oct 9, 2025
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