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Mem_DBCV Public
Memory Efficient implementation in Python of Density-Based Clustering Validation (DBCV) metric. Adapted from the Fast DBCV calculation
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MetadataStandards Public
Forked from NFDI4Microbiota/MetadataStandardsThe primary objective of this GitHub page is to serve as a centralized repository for existing (meta)data standards.
TeX Creative Commons Attribution 4.0 International UpdatedAug 12, 2024 -
DBCV_Batch Public
Forked from FelSiq/DBCVMemory Efficient implementation in Python of Density-Based Clustering Validation (DBCV) metric. Adapted from the Fast DBCV calculation
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submg Public
Forked from metagenomics/submgENA metagenome upload
Python MIT License UpdatedMay 17, 2024 -
nfdi4microbiota-knowledge-base Public
Forked from NFDI4Microbiota/nfdi4microbiota-knowledge-baseThe NFDI4Microbiota Knowledge Base
CSS Creative Commons Attribution 4.0 International UpdatedFeb 16, 2024 -
MuDoGeR Public
Forked from mdsufz/MuDoGeRMuDoGeR makes the recovery of genomes from prokaryotes, viruses, and eukaryotes from metagenomes easy.
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partie Public
Forked from linsalrob/partiePARTIE is a program to partition sequence read archive (SRA) metagenomics data into amplicon and shotgun data sets. The user-supplied annotations of the data sets can not be trusted, and so PARTIE …
Perl MIT License UpdatedFeb 17, 2022 -
microbiomeMarker Public
Forked from yiluheihei/microbiomeMarkerR package for microbiome biomarker discovery
R GNU General Public License v3.0 UpdatedAug 24, 2021 -
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hmdb_scripts Public
Forked from tmdb-team/tmdbHumanMetagenomeDB: a public repository of curated and standardized metadata for human metagenomes
Python UpdatedJul 14, 2020 -
pymfe Public
Forked from ealcobaca/pymfePython Meta-Feature Extractor package.
Python Other UpdatedSep 6, 2019 -
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qiime2 Public
Forked from qiime2/qiime2Official repository for the QIIME 2 framework.
Python BSD 3-Clause "New" or "Revised" License UpdatedAug 23, 2019 -
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dna2vec Public
Forked from pnpnpn/dna2vecdna2vec: Consistent vector representations of variable-length k-mers
Python MIT License UpdatedOct 10, 2017