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Concise and beautiful algorithms written in Julia

Julia 1,344 92 Updated Mar 4, 2025

Protein Graph Library

Jupyter Notebook 1,071 132 Updated Mar 3, 2025

ANI-1 neural net potential with python interface (ASE)

Python 221 55 Updated Mar 11, 2024

A Julia-based framework for molecular modelling

Julia 60 7 Updated Feb 11, 2024

Icolos: A workflow manager for structure based post-processing of de novo generated small molecules

Python 55 15 Updated Mar 16, 2023

CUDA programming in Julia.

Julia 1,262 238 Updated Mar 12, 2025

Explicit SIMD vector operations for Julia

Julia 182 35 Updated Jan 8, 2025

Flight rules for git

42,016 3,198 Updated Aug 27, 2024

A Julia package to read, write and manipulate macromolecular structures

Julia 99 23 Updated Mar 10, 2025

Graph-based molecule modeling toolkit for cheminformatics

Julia 208 29 Updated Mar 5, 2025

Library for compile-time computing in julia

Julia 71 3 Updated Nov 27, 2023

A repository to complex use cases examples of ProtoSyn.jl

Jupyter Notebook 2 Updated Aug 16, 2022

The single instruction C compiler

C 9,675 404 Updated May 29, 2024

UniRep model, usage, and examples.

Python 347 97 Updated Jun 21, 2022

A generic, simple and fast implementation of Deepmind's AlphaZero algorithm.

Julia 1,265 138 Updated Jan 5, 2025

Code for our paper "Protein sequence design with a learned potential"

Python 80 22 Updated Sep 8, 2023

Code for article "Current structure predictors are not learning the physics of protein folding" by Outeiral et al. (Bioinformatics, 2022)

Python 8 Updated Dec 17, 2021

Run keras models with a Flux backend

Julia 21 3 Updated Aug 7, 2018

A Julian abstract interface for atomic structures.

Julia 88 20 Updated Jan 26, 2025

Paper: Fast and accurate prediction of partial charges using Atom-Path-Descriptor-based machine learning

Python 9 3 Updated Jun 26, 2020

Birds of Feather discussion at the Juliacon2021

8 1 Updated Jul 28, 2021

Julia package towards classical molecular modeling of nanoporous materials

Jupyter Notebook 53 13 Updated Jun 27, 2024

JavaScript framework for visual programming

TypeScript 10,436 657 Updated Jan 5, 2025

A list of SaaS, PaaS and IaaS offerings that have free tiers of interest to devops and infradev

HTML 92,723 10,044 Updated Mar 12, 2025

Turn (almost) any Python command line program into a full GUI application with one line

Python 21,002 1,027 Updated Mar 13, 2025

Molecular simulation in Julia

Julia 425 56 Updated Mar 12, 2025

Density-functional toolkit

Julia 463 92 Updated Mar 11, 2025
Julia 6 Updated Sep 13, 2022

Display Matplotlib plots in the console

Python 4 Updated Feb 21, 2025