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1. nucleotide-transformer nucleotide-transformer Public

   Forked from instadeepai/nucleotide-transformer

   🧬 Nucleotide Transformer: Building and Evaluating Robust Foundation Models for Human Genomics

   Python

2. SelectionInLatinAmericans SelectionInLatinAmericans Public

   Scripts used to detect and classify signals of selection in Latin Americans used in Mendoza-Revilla Javier et al. 2022

   R

3. VCF2FASTA VCF2FASTA Public

   Given a VCF file and a reference FASTA file, returns two sequences for each variant, with the reference and variant (alternative) allele inserted into the sequence at the appropriate position.

   Python

4. InSilicoMutagenesisFASTA InSilicoMutagenesisFASTA Public

   Mutates every base of each DNA sequence in the input FASTA file and outputs a FASTA of all mutated sequences.

   Python