Commits

Branch selector

 master

User selector

All users

Datepicker

All time

Commit History

Commits on Feb 15, 2022

• Update msg.cfg

  Show description for 8996972
  dstern

  authored
  8996972

  Copy full SHA for 8996972

Commits on Aug 3, 2021

• Update README.md

  Show description for b526660
  olbris

  authored
  b526660

  Copy full SHA for b526660

• Update README.md

  olbris

  authored
  d24dd87

  Copy full SHA for d24dd87

• Update README.md

  Show description for f65d927
  olbris

  authored
  f65d927

  Copy full SHA for f65d927

Commits on Jul 26, 2021

• Update README.md

  Show description for 1b34c5a
  olbris

  authored
  1b34c5a

  Copy full SHA for 1b34c5a

Commits on Apr 2, 2021

• Update README.md

  olbris

  authored
  934812f

  Copy full SHA for 934812f

Commits on Mar 11, 2021

• updated README on master to deprecate branch in favor of dev

  olbris

  committed
  328ed1b

  Copy full SHA for 328ed1b

Commits on Mar 30, 2017

• Removing zoo dependency and adding cloud comments, update AMI ID for cloud runs

  

  lorax

  authored and

  lorax

  committed
  f361369

  Copy full SHA for f361369

Commits on Oct 27, 2016

• fixed 0-d array failure

  Show description for d2f06f5
  dstern

  committed
  d2f06f5

  Copy full SHA for d2f06f5

Commits on Oct 15, 2016

• updated required dependencies

  dstern

  committed
  a19ceae

  Copy full SHA for a19ceae

• updated R dependencies

  dstern

  committed
  1830621

  Copy full SHA for 1830621

Commits on Oct 14, 2016

• Merge pull request #42 from YourePrettyGood/simple-fixes

  Show description for 94a83e1
  dstern

  authored
  94a83e1

  Copy full SHA for 94a83e1

Commits on Oct 5, 2016

• Reduce memory consumption by deallocating unused variables

  Show description for 5fb781a
  YourePrettyGood

  committed
  5fb781a

  Copy full SHA for 5fb781a

Commits on Aug 31, 2016

• Fixed inconsistent bwa_alg values

  Show description for ced52ed
  YourePrettyGood

  committed
  ced52ed

  Copy full SHA for ced52ed

• Fixed AS-XS diff comparison signs

  Show description for ec86935
  YourePrettyGood

  committed
  ec86935

  Copy full SHA for ec86935

• Copy-paste typo for filter-sam.py

  Show description for 13b0a56
  YourePrettyGood

  committed
  13b0a56

  Copy full SHA for 13b0a56

Commits on Aug 28, 2016

• Python line wrapping issue with BWA-MEM incorporation

  Show description for 3eefb1e
  YourePrettyGood

  committed
  3eefb1e

  Copy full SHA for 3eefb1e

• First attempt at adding support for BWA-MEM

  Show description for 3b19539
  YourePrettyGood

  committed
  3b19539

  Copy full SHA for 3b19539

• Fix for Perl >= 5.14

  Show description for e070195
  YourePrettyGood

  committed
  e070195

  Copy full SHA for e070195

• Fix for new versions of rainbow

  Show description for 1eb60ac
  YourePrettyGood

  committed
  1eb60ac

  Copy full SHA for 1eb60ac

• Minor grep bug fix

  Show description for b2d5ac8
  YourePrettyGood

  committed
  b2d5ac8

  Copy full SHA for b2d5ac8

• Bug fix for FASTA files with a sequence labeled "0"

  Show description for 2019611
  YourePrettyGood

  committed
  2019611

  Copy full SHA for 2019611

• Bug fix for structurally-varying parentals

  Show description for 77559c4
  YourePrettyGood

  committed
  77559c4

  Copy full SHA for 77559c4

• Merge pull request #1 from JaneliaSciComp/master

  Show description for f7f2ec7
  YourePrettyGood

  authored
  f7f2ec7

  Copy full SHA for f7f2ec7

Commits on Apr 8, 2016

• Added handling of haplodiploid species

  Show description for 2a45785
  

  YourePrettyGood

  authored and

  gregpinero

  committed
  2a45785

  Copy full SHA for 2a45785

• Bug fix for HMM plots for non-"X" sex chromosomes

  Show description for 7606197
  

  YourePrettyGood

  authored and

  gregpinero

  committed
  7606197

  Copy full SHA for 7606197

Commits on Feb 19, 2016

• Updated cloud instructions to help with common issues and be clearer

  

  Greg Pinero

  committed
  ef69db3

  Copy full SHA for ef69db3

Commits on Jan 26, 2016

• Fixed numpy typo

  dstern

  committed
  5b906d9

  Copy full SHA for 5b906d9

Commits on Jan 20, 2016

• Updated AMI ID in instructions to match newly created public AMI (for msg with starcluster

  

  Greg Pinero

  committed
  19f84aa

  Copy full SHA for 19f84aa

Commits on Sep 22, 2015

• MSG Manual

  Show description for 8baeb4a
  dstern

  committed
  8baeb4a

  Copy full SHA for 8baeb4a

• Update version

  gregpinero

  committed
  1d853e0

  Copy full SHA for 1d853e0

Commits on Jul 30, 2015

• Always quality trim files if requested even when already parsed

  gregpinero

  committed
  10eb4f8

  Copy full SHA for 10eb4f8

Commits on Jul 29, 2015

• Merge branch 'master' of github.com:JaneliaSciComp/msg

  gregpinero

  committed
  595bb90

  Copy full SHA for 595bb90

Commits on Jan 28, 2015

• Added difffac parameter to msg.cfg file

  dstern

  committed
  105e2d0

  Copy full SHA for 105e2d0

Commits on Jan 27, 2015

• Update msg.cfg

  Show description for 53a849a
  dstern

  committed
  53a849a

  Copy full SHA for 53a849a

Pagination

Previous

Next