Mathscinet search is not working

[TimAlderson]

JabRef version

5.12 (latest release)

Operating system

Windows

Details on version and operating system

No response

Checked with the latest development build (copy version output from About dialog)

• I made a backup of my libraries before testing the latest development version.
• I have tested the latest development version and the problem persists

Steps to reproduce the behaviour

Was #10499 closed because it was fixed, or because work is not planned?

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Perform Web search Mathscinet in Jabref

Appendix

...

Log File

Error:
org.jabref.logic.importer.FetcherException: An internal parser error occurred while fetching from https://mathscinet.ams.org/mathscinet/api/publications/search?query=algebraic+geometric+codes+basic+notions&currentPage=1&pageSize=100
at org.jabref@5.12.60000/org.jabref.logic.importer.SearchBasedParserFetcher.getBibEntries(Unknown Source)
at org.jabref@5.12.60000/org.jabref.logic.importer.SearchBasedParserFetcher.performSearch(Unknown Source)
at org.jabref@5.12.60000/org.jabref.logic.importer.SearchBasedFetcher.performSearch(Unknown Source)
at org.jabref@5.12.60000/org.jabref.gui.importer.fetcher.WebSearchPaneViewModel.lambda$search$2(Unknown Source)
at org.jabref@5.12.60000/org.jabref.gui.util.BackgroundTask$1.call(Unknown Source)
at org.jabref@5.12.60000/org.jabref.gui.util.DefaultTaskExecutor$1.call(Unknown Source)
at org.jabref.merged.module@5.12.60000/javafx.concurrent.Task$TaskCallable.call(Unknown Source)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.base/java.lang.Thread.run(Unknown Source)
Caused by: org.jabref.logic.importer.ParseException: Error when parsing entry
at org.jabref@5.12.60000/org.jabref.logic.importer.fetcher.MathSciNet.lambda$getParser$0(Unknown Source)
... 13 more
Caused by: kong.unirest.json.JSONException: JSONObject["all"] not found.
at org.jabref.merged.module@5.12.60000/kong.unirest.json.JSONObject.getProperty(Unknown Source)
at org.jabref.merged.module@5.12.60000/kong.unirest.json.JSONObject.getJSONObject(Unknown Source)
... 14 more

[TimAlderson]

Sorry..wrong log file. Here is the file from the most recent :

org.jabref.logic.importer.FetcherException: An internal parser error occurred while fetching from https://mathscinet.ams.org/mathscinet/api/publications/search?query=algebraic+geometric+codes+basic+notions&currentPage=1&pageSize=100
at org.jabref@5.13.233/org.jabref.logic.importer.SearchBasedParserFetcher.getBibEntries(Unknown Source)
at org.jabref@5.13.233/org.jabref.logic.importer.SearchBasedParserFetcher.performSearch(Unknown Source)
at org.jabref@5.13.233/org.jabref.logic.importer.SearchBasedFetcher.performSearch(Unknown Source)
at org.jabref@5.13.233/org.jabref.gui.importer.fetcher.WebSearchPaneViewModel.lambda$search$2(Unknown Source)
at org.jabref@5.13.233/org.jabref.gui.util.BackgroundTask$1.call(Unknown Source)
at org.jabref@5.13.233/org.jabref.gui.util.DefaultTaskExecutor$1.call(Unknown Source)
at org.jabref.merged.module@5.13.233/javafx.concurrent.Task$TaskCallable.call(Unknown Source)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at java.base/java.util.concurrent.Executors$RunnableAdapter.call(Unknown Source)
at java.base/java.util.concurrent.FutureTask.run(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(Unknown Source)
at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(Unknown Source)
at java.base/java.lang.Thread.run(Unknown Source)
Caused by: org.jabref.logic.importer.ParseException: Error when parsing entry
at org.jabref@5.13.233/org.jabref.logic.importer.fetcher.MathSciNet.lambda$getParser$0(Unknown Source)
... 13 more
Caused by: kong.unirest.json.JSONException: JSONObject["all"] not found.
at org.jabref.merged.module@5.13.233/kong.unirest.json.JSONObject.getProperty(Unknown Source)
at org.jabref.merged.module@5.13.233/kong.unirest.json.JSONObject.getJSONObject(Unknown Source)
... 14 more

[Siedlerchr]

It would be helpful if you could execute the request in the browser and send/paste us the json file as response so we can look at it. Problem is that we currently don't have a subscription to mathcinet and could not verify this

[TimAlderson]

Thank you for the reply.
I have been searching how to extract a json file using Firefox, but have been unable to figure it out. Any chance of a hint on how to do that?

[Siedlerchr]

It should be possible using the Developer Tools (F12):
(It's German, but basically network analysis tab -> then select the request where it shows json -> Right click -> Save answer should give the json

[TimAlderson]

Thank you.
Here are the results from facets and search respectively:

{"authors":[],"journals":[],"entryTypes":[],"itemTypes":[],"reviewStatuses":[],"publicationTypes":[],"primaryClassifications":[],"publicationYears":[],"institutions":[],"statuses":[]}

{"results":[],"total":0}

I performed another search which had more than 0 results (snip below). Is there a file that is more helpful than those above?

[Siedlerchr]

The json for the search with more than zero results would be nice!

[TimAlderson]

Facets:

{"authors":[{"id":"758603","value":"Alderson, Tim L.","total":27},{"id":"692091","value":"Mellinger, Keith E.","total":9},{"id":"42380","value":"Bruen, Aiden A.","total":4},{"id":"50285","value":"Cohen, Gérard D.","total":1},{"id":"615685","value":"Gács, András","total":1},{"id":"1068150","value":"Huntemann, Svenja","total":1},{"id":"1251963","value":"Neri, Alessandro<sup>1</sup>","total":1},{"id":"149440","value":"Rodier, François","total":1},{"id":"863999","value":"Shi, Minjia","total":1},{"id":"191601","value":"Silverman, Robert","total":1},{"id":"225546","value":"Solé, Patrick","total":1},{"id":"1276838","value":"Zhu, Hongwei<sup>1</sup>","total":1}],"journals":[{"id":"6036","value":"Des. Codes Cryptogr.","total":5},{"id":"2292","value":"IEEE Trans. Inform. Theory","total":3},{"id":"6241","value":"Adv. Math. Commun.","total":2},{"id":"4449","value":"Appl. Algebra Engrg. Comm. Comput.","total":2},{"id":"643","value":"Discrete Math.","total":2},{"id":"5510","value":"Ann. Comb.","total":1},{"id":"6137","value":"Antarct. J. Math.","total":1},{"id":"7425","value":"Atl. Electron. J. Math.","total":1},{"id":"4117","value":"Bull. Inst. Combin. Appl.","total":1},{"id":"615","value":"Discrete Appl. Math.","total":1},{"id":"4633","value":"Electron. J. Combin.","total":1},{"id":"4801","value":"Finite Fields Appl.","total":1},{"id":"6154","value":"Innov. Incidence Geom.","total":1},{"id":"7248","value":"Int. J. Inf. Coding Theory","total":1},{"id":"1833","value":"J. Combin. Theory Ser. A","total":1},{"id":"5169","value":"SIAM J. Discrete Math.","total":1},{"id":"8218","value":"Trans. Comb.","total":1}],"entryTypes":[],"itemTypes":[],"reviewStatuses":[{"id":"Reviewed","value":"Reviewed","total":20},{"id":"Summary","value":"Summary","total":10},{"id":"Indexed","value":"Indexed","total":1}],"publicationTypes":[{"id":"Journal Article","value":"Journal Article","total":26},{"id":"Book Collection","value":"Book Collection","total":2},{"id":"Book Collection Article","value":"Book Collection Article","total":2},{"id":"Thesis","value":"Thesis","total":1}],"primaryClassifications":[{"id":"94","value":"Information and communication theory, circuits","total":26},{"id":"51","value":"Geometry ","total":3},{"id":"11","value":"Number theory","total":1}],"publicationYears":[{"id":"2020","value":"2020","total":1},{"id":"2019","value":"2019","total":4},{"id":"2018","value":"2018","total":1},{"id":"2014","value":"2014","total":1},{"id":"2011","value":"2011","total":1},{"id":"2010","value":"2010","total":3},{"id":"2009","value":"2009","total":2},{"id":"2008","value":"2008","total":8},{"id":"2007","value":"2007","total":5},{"id":"2006","value":"2006","total":2},{"id":"2005","value":"2005","total":2},{"id":"2002","value":"2002","total":1}],"institutions":[{"id":"Department of Mathematics, University of New Brunswick","value":"Department of Mathematics, University of New Brunswick","total":21},{"id":"Department of Mathematics, University of Mary Washington","value":"Department of Mathematics, University of Mary Washington","total":9},{"id":"Department of Electrical and Computer Engineering, University of Calgary","value":"Department of Electrical and Computer Engineering, University of Calgary","total":4},{"id":"Department of Mathematics and Statistics, University of New Brunswick","value":"Department of Mathematics and Statistics, University of New Brunswick","total":4},{"id":"Department of Computer Science, Eötvös Loránd University (ELTE)","value":"Department of Computer Science, Eötvös Loránd University (ELTE)","total":1},{"id":"Department of Mathematics and Statistics, Wright State University","value":"Department of Mathematics and Statistics, Wright State University","total":1},{"id":"Institut de Mathématiques de Luminy, Centre National de la Recherche Scientifique (CNRS)","value":"Institut de Mathématiques de Luminy, Centre National de la Recherche Scientifique (CNRS)","total":1},{"id":"Laboratoire d'Analyse, Géométrie et Applications (LAGA), Université de Paris VIII (Université Paris 8 Vincennes-Saint-Denis)","value":"Laboratoire d'Analyse, Géométrie et Applications (LAGA), Université de Paris VIII (Université Paris 8 Vincennes-Saint-Denis)","total":1},{"id":"Laboratory of Intelligent Computing and Signal Processing, Anhui University","value":"Laboratory of Intelligent Computing and Signal Processing, Anhui University","total":1},{"id":"Mathematisches Institut (I-Math), Universität Zürich","value":"Mathematisches Institut (I-Math), Universität Zürich","total":1},{"id":"School of Mathematics, Anhui University","value":"School of Mathematics, Anhui University","total":1},{"id":"University of New Brunswick","value":"University of New Brunswick","total":1},{"id":"École Nationale Supérieure de Télécommunications (Telecom ParisTech)","value":"École Nationale Supérieure de Télécommunications (Telecom ParisTech)","total":1}],"statuses":[]}

Search:

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Theory"},"volSlash":"N","isbn":null,"elementOrd":null},"translatedIssue":null},"book":null,"reviewer":{"public":true,"reviewers":[{"authId":889610,"rvrCode":85231,"name":"Jitman, Somphong"}]},"paging":{"paging":{"text":"5414--5418"},"translatedPaging":null},"counts":{"cited":2},"itemType":"Reviewed","articleUrl":"https://doi.org/10.1109/TIT.2020.2977319","openURL":{"imageLink":"http://www.lib.unb.ca/img/asin/res20x150.gif","targetLink":"https://unb.on.worldcat.org/atoztitles/link?ctx_ver=Z39.88-2004&ctx_enc=info:ofi/enc:UTF-8&rfr_id=info:sid/ams.org:MathSciNet&rft_val_fmt=info:ofi/fmt:kev:mtx:journal&rft_id=info:doi/10.1109%2FTIT.2020.2977319&rft.aufirst=Tim&rft.auinit=TL&rft.auinit1=T&rft.auinitm=L&rft.aulast=Alderson&rft.genre=article&rft.issn=00189448&rft.title=Institute of Electrical and Electronics Engineers  Transactions on Information Theory&rft.atitle=On the weights of general MDS codes&rft.stitle=IEEE Trans  Inform  Theory&rft.volume=66&rft.date=2020&rft.spage=5414&rft.epage=5418&rft.pages=5414-5418&rft.issue=9&rft.jtitle=Institute of Electrical and Electronics Engineers  Transactions on Information Theory","textLink":""},"prePubl":null,"public":true},{"mrnumber":4019905,"titles":{"title":"$n$-dimensional optical orthogonal codes, bounds and optimal constructions","translatedTitle":null},"entryType":"J","primaryClass":{"code":"94B65","description":"Bounds on codes"},"authors":[{"id":758603,"name":"Alderson, T. L."}],"issue":{"issue":{"pubYear":2019,"pubYear2":null,"volume":"30","volume2":null,"volume3":null,"number":"5","journal":{"id":4449,"shortTitle":"Appl. Algebra Engrg. Comm. 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L."},{"id":1068150,"name":"Huntemann, Svenja"}],"issue":{"issue":{"pubYear":2014,"pubYear2":null,"volume":"6","volume2":null,"volume3":null,"number":"1","journal":{"id":7425,"shortTitle":"Atl. Electron. J. 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[Siedlerchr]

Thanks a lot, this is really helpful!
Judging from the json, we need to add a new parser for the search results
Steps for implementation

1. Add a check if we have key all in response .

   jabref/src/main/java/org/jabref/logic/importer/fetcher/MathSciNet.java

   Lines 118 to 119 in 2a7fc1a

   	var element = node.getObject();
   	JSONArray entriesArray = element.getJSONObject("all").getJSONArray("results");

2. Add a new else if for the search result case
3. Create a new MathSciNetParser + Test using the provided json
4. Parse the json and return bib entries