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An OMERO CLI plugin for creating transfer packets between OMERO servers.

Python 17 15 Updated Apr 15, 2025

Project planning and material repository for the 2024 challenge to generate 1 PB of OME-Zarr data

Python 19 14 Updated Apr 15, 2025

Scripts for uploading the MetroloJ QC plugin results to Omero

2 Updated Apr 4, 2025

This repository contains software that was developed to add metadata annotations to bioimage data before importing it into OMERO

Python 5 Updated Dec 3, 2024

This is the documentation for the OMERO Importer Python tool.

Python 1 Updated May 10, 2024

This repository contains software that was developed for the management of bioimage data generated at UMass Chan Medical School and as part of the Canada Bioimaging RDM initiative.

Java 4 1 Updated May 3, 2024

BIOMERO - A python library for easy connecting between OMERO (jobs) and a Slurm cluster

Python 14 4 Updated Mar 27, 2025

About Me :)

1 Updated Feb 3, 2024
1 Updated Oct 7, 2020

Official QEMU mirror. Please see https://www.qemu.org/contribute/ for how to submit changes to QEMU. Pull Requests are ignored. Please only use release tarballs from the QEMU website.

C 11,151 5,886 Updated Apr 16, 2025

The 4DN + BINA Tiered System of Microscopy Metadata Guidelines was developed by the 4DN Imaging Standards Working Group in collaboration with the BINA Data Management and Quality Control Working Gr…

15 4 Updated Jun 20, 2023

Favorite imaging analysis tools of NEUBIAS members - editor Kota Miura

Jupyter Notebook 4 Updated May 25, 2023

Infinitely take notes, sketch and learn. Xournal++ Mobile is a port of Xournal++ files and features to various mobile platofrms and the web. Mirror of the Xournal++ Mobile repository on GitLab.

Dart 388 21 Updated May 30, 2021

Metadata files for the idr0064 submission

Python 1 3 Updated May 3, 2023

This is the React implementation of Micro-Meta App, Microscopy Metadata for the real world!

JavaScript 7 2 Updated Apr 13, 2025

Xournal++ is a handwriting notetaking software with PDF annotation support. Written in C++ with GTK3, supporting Linux (e.g. Ubuntu, Debian, Arch, SUSE), macOS and Windows 10. Supports pen input fr…

C++ 12,500 876 Updated Apr 16, 2025

Run macOS on QEMU/KVM. With OpenCore + Monterey + Ventura + Sonoma support now! Only commercial (paid) support is available now to avoid spammy issues. No Mac system is required.

Python 21,541 1,916 Updated Apr 17, 2025

Illustrations created by Henning Falk for the Zarr community

Shell 34 1 Updated Jan 29, 2025

Non-comprehensive list of projects and resources related to open microscopy.

141 29 Updated Mar 27, 2025

Microscope control and image acquisition integrated with ImageJ

Java 270 233 Updated Apr 18, 2025

A set of commands which wrap Metroloj functionality and allows it to be called from KNIME/IJ2

Java 1 Updated Jun 21, 2019

calculations and all things quarep-limi

Jupyter Notebook 1 Updated Jan 7, 2021

OME (Open Microscopy Environment) develops open-source software and data format standards for the storage and manipulation of biological light microscopy data. A joint project between universities,…

Java 210 102 Updated Apr 3, 2025

Electron wrapped, stand-alone version of Micro-Meta App, microscopy metadata for the real world!

JavaScript 7 1 Updated Mar 16, 2025

This is a limited-functionality, beta - implementation of the integration of Micro-Meta App in the OMERO.web client

JavaScript 4 2 Updated Aug 21, 2024