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Commits on Nov 13, 2014

• Consolidate documentation into a single location in source.

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Commits on Nov 12, 2014

• Merge pull request bigdatagenomics#471 from neurons/fix_readme

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Commits on Nov 7, 2014

• Merge pull request bigdatagenomics#451 from ryan-williams/view

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• Merge pull request bigdatagenomics#466 from allenday/master

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Commits on Nov 5, 2014

• Remove unused val from Reads2Ref

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Commits on Nov 4, 2014

• Merge pull request bigdatagenomics#459 from ryan-williams/jenkins

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• Project only the sequence when kmer/qmer counting

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Commits on Nov 3, 2014

• Merge pull request bigdatagenomics#450 from ryan-williams/saving

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• Merge pull request bigdatagenomics#455 from fnothaft/add-serializers

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Commits on Nov 2, 2014

• Update the contribution guidelines

  

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• Better null handling for isSameContig utility

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• Merge pull request bigdatagenomics#417 from niranjan93/NK_schema_tags

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Commits on Nov 1, 2014

• Merge pull request bigdatagenomics#449 from ryan-williams/origqual

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Commits on Oct 31, 2014

• Bump scala from 2.10.3 to 2.10.4

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• Revert "[ADAM-237] Migrate to Chill serialization libraries."

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Commits on Oct 21, 2014

• Merge pull request bigdatagenomics#427 from fnothaft/indel-realigner-errors

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Commits on Oct 10, 2014

• Merge pull request bigdatagenomics#408 from fnothaft/fastq-output

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Commits on Oct 1, 2014

• Merge pull request bigdatagenomics#385 from fnothaft/fastq-input

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Commits on Sep 29, 2014

• Merge pull request bigdatagenomics#400 from fnothaft/fix-formats-link

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Commits on Sep 24, 2014

• Merge pull request bigdatagenomics#394 from fnothaft/fun-suite

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Commits on Sep 20, 2014

• Merge pull request bigdatagenomics#391 from fnothaft/chill-serializers

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Commits on Sep 18, 2014

• Merge pull request bigdatagenomics#380 from nfergu/markduplicateschanges

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Commits on Sep 16, 2014

• [maven-release-plugin] prepare for next development iteration

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• [maven-release-plugin] prepare release adam-parent-0.14.0

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• Updating CHANGES.md for our 0.14.0 release

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• Merge pull request bigdatagenomics#376 from fnothaft/htsjdk-migration

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• Merge pull request bigdatagenomics#378 from fnothaft/spark-1.1.0

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Commits on Sep 15, 2014

• Merge pull request bigdatagenomics#377 from fnothaft/register-serializers

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Commits on Sep 8, 2014

• Merge pull request bigdatagenomics#370 from fnothaft/readme-fix

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Commits on Sep 2, 2014

• Merge pull request bigdatagenomics#354 from fnothaft/fix-distributed-legacy-output

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• Merge pull request bigdatagenomics#357 from fnothaft/java-plugins

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Commits on Aug 29, 2014

• Merge pull request bigdatagenomics#352 from fnothaft/fix-failing-mdtag

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Commits on Aug 21, 2014

• Merge pull request bigdatagenomics#364 from fnothaft/fix-csberkeley

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Commits on Aug 20, 2014

• Update the CHANGES.md after the 0.13.0 release

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Commits on Aug 7, 2014

• Merge pull request bigdatagenomics#347 from karenfeng/visfix

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