Increase Optimus retries (#160)

* Update pipeline-tools version * Increase Optimus maxRetries option
HumanCellAtlas · Jul 30, 2019 · e56129f · e56129f
1 parent b32be2b
commit e56129f
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Showing 5 changed files with 5 additions and 5 deletions.
diff --git a/adapter_pipelines/Optimus/adapter.wdl b/adapter_pipelines/Optimus/adapter.wdl
@@ -139,7 +139,7 @@ workflow AdapterOptimus {
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.56.0"
+  String pipeline_tools_version = "v0.56.1"
 
   call GetInputs as prep {
     input:

diff --git a/adapter_pipelines/Optimus/options.json b/adapter_pipelines/Optimus/options.json
@@ -3,6 +3,6 @@
   "read_from_cache": true,
   "backend": "PAPIv2",
   "default_runtime_attributes": {
-    "maxRetries": 1
+    "maxRetries": 3
   }
 }
diff --git a/adapter_pipelines/cellranger/adapter.wdl b/adapter_pipelines/cellranger/adapter.wdl
@@ -149,7 +149,7 @@ workflow Adapter10xCount {
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.56.0"
+  String pipeline_tools_version = "v0.56.1"
 
   call GetInputs {
     input:

diff --git a/adapter_pipelines/ss2_single_end/adapter.wdl b/adapter_pipelines/ss2_single_end/adapter.wdl
@@ -70,7 +70,7 @@ workflow AdapterSmartSeq2SingleCellUnpaired {
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.56.0"
+  String pipeline_tools_version = "v0.56.1"
 
   call GetInputs as prep {
     input:

diff --git a/adapter_pipelines/ss2_single_sample/adapter.wdl b/adapter_pipelines/ss2_single_sample/adapter.wdl
@@ -70,7 +70,7 @@ workflow AdapterSmartSeq2SingleCell{
   Int max_cromwell_retries = 0
   Boolean add_md5s = false
 
-  String pipeline_tools_version = "v0.56.0"
+  String pipeline_tools_version = "v0.56.1"
 
   call GetInputs as prep {
     input: