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py3 compatibility, bug fix #3

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@harrlol harrlol commented Aug 3, 2023

  • This update will no longer support Python 2.x.x and requires all previous users to install Python 3
  • bug fix in summarizeEndMismatches.py for edge cases

@harrlol harrlol changed the title Updating HAMR to be compatible with Python 3 py3 compatibility, bug fix Jul 11, 2024
original implementation by riruruteja, this changes output files .raw.txt, .mods.txt, and .bed
direct difference: 1 bp difference compared to previous commit in the pos column of .raw.txt and .mods.txt, 1bp column in the pos field in the 4th column of .bed
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