Issues when running constructReadClassTables.R

[cying111]

Error in as.vector(x, mode) :
coercing an AtomicList object to an atomic vector is supported only for
objects with top-level elements of length <= 1
9.stop("coercing an AtomicList object to an atomic vector ", "is supported only for\n",
" objects with top-level elements of length <= 1")
8.as.vector(x, mode)
7.as.vector(x, mode)
6.as.vector(x, mode = "character")
5..local(x, ...)
4.as.character(new("CompressedNumericList", elementType = "numeric",
elementMetadata = NULL, metadata = list(), unlistData = c(108868633,
108868635, 108874895, 108877995, 108878623, 108879446, 108880052,
108881705, 108882125, 108885768, 108868688, 108874895, 108877995, ...
3.as.character(new("CompressedNumericList", elementType = "numeric",
elementMetadata = NULL, metadata = list(), unlistData = c(108868633,
108868635, 108874895, 108877995, 108878623, 108879446, 108880052,
108881705, 108882125, 108885768, 108868688, 108874895, 108877995, ...
2.paste(intronEndCoordinates[uniqueReadNames] + 1, collapse = ",") at constructReadClassTables.R#70
1.constructSplicedReadClassTables(uniqueJunctions, unlisted_junctions,
readData$readGrglist, readData$readNames)

[cying111]

resolved by replacing
paste(intronEndCoordinates[uniqueReadNames] + 1, collapse = ",")
with
sapply(intronEndCoordinates[uniqueReadNames]+1,paste0, collapse=',')