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Number of fastp threads generated by preprocess step in quant.nf doesn't seem to be limited by cpus argument or params.maxcpus

Status: Open.

#22 In Gibbons-Lab/medi;

· alexvcrr opened on Feb 20, 2025

Minimum Eukaryote sequences required for reliable nutrition indicators?

Status: Open.

#18 In Gibbons-Lab/medi;

· BioinfoPhD opened on Jan 10, 2025

Persistent error in database.nf

Status: Open.

#16 In Gibbons-Lab/medi;

· luhugerth opened on Dec 10, 2024

Missing Genome in matches.csv

Status: Open.

#15 In Gibbons-Lab/medi;

· ktmbiome-niaid opened on Dec 6, 2024

Is there a pre-built database available for download?

Status: Open.

#14 In Gibbons-Lab/medi;

· yejunbin opened on Oct 3, 2024

Curl error connection download_sequences

Status: Open.

#11 In Gibbons-Lab/medi;

· MarwanMaj opened on Jun 14, 2024

add_existing failed

Status: Open.

#10 In Gibbons-Lab/medi;

· jjoropezav opened on Apr 11, 2024

build_kraken add_existing fails at least for bacteria group

Status: Open.

#4 In Gibbons-Lab/medi;

· cschu opened on Feb 11, 2024