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Fix VersionConverter encoding issue #296

Merged
merged 7 commits into from
Jul 25, 2018
Merged

Fix VersionConverter encoding issue #296

merged 7 commits into from
Jul 25, 2018

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mpsonntag
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@mpsonntag mpsonntag commented Jul 24, 2018 •
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  • This PR closes VersionConverter encoding problem #288, fixing that an XML file with an UTF-8 encoding file header was not being properly parsed by the VersionConverter XML parser.
  • The PR also addresses issue version converter: incomplete string conversion #295 which occurred in the xmlparser: When reading a single string value from csv which contains commata, it now remains a single value and is not split up at each comma.
    Further, any leading or trailing whitespaces are removed from any string values when it is written to
    csv. Along the same lines, multiple values that are saved to file via the version_converter do not contain leading whitespaces any longer.
  • The travis build for macOS with python 3.5 was removed, since the pyyaml dependency was failing for python 3.5.

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coveralls commented Jul 24, 2018 •
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Coverage Status

Coverage increased (+0.01%) to 81.777% when pulling 46a4fbb on mpsonntag:fixConverter into a75d1db on G-Node:master.

@mpsonntag
[tools/xmlparser] Fix from_csv single str val read
eed09df 
Closes G-Node#295

When reading a single string value from csv
which is containing commata, make sure,
that it still remains a single string value
and is not split up into a multi value at
the comma positions.
@mpsonntag
[tools/xmlparser] Strip ws and quotes on to_csv
9fa62d8 
When writing multiple values to csv make sure
that whitespaces and carriage return linefeeds
as well as quotation marks that have been
added by the csv writer are removed before
returning the csv string.
@mpsonntag
[tools/versionConv] Save multivals w/o whitespace
4e134aa
@mpsonntag
[test/versionConv] Fix changed multival save
40bc156
@mpsonntag
[travis] Unsupport py3.5 on macOS
35161bc
@mpsonntag
[test/versionConv] Add strng value tests
46a4fbb
jgrewe
jgrewe reviewed Jul 25, 2018
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odml/tools/xmlparser.py
# is part of the value and must not be used to
# split up the string.
return [value_string]

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👍

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@JuliaSprenger caught that one, I'm just taking it one step further. ;)

jgrewe
jgrewe approved these changes Jul 25, 2018
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good catch!

@achilleas-k achilleas-k merged commit 04b408f into G-Node:master Jul 25, 2018
@mpsonntag mpsonntag deleted the fixConverter branch July 25, 2018 14:19
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@achilleas-k achilleas-k achilleas-k approved these changes

@jgrewe jgrewe jgrewe approved these changes

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VersionConverter encoding problem
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@mpsonntag @coveralls @jgrewe @achilleas-k