Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

DumpVEP: fix QC step for using non-reference sequence #1727

Merged
merged 1 commit into from
Jul 25, 2024

Conversation

nakib103
Copy link
Contributor

Related PR: #1718

In above PR we updated the pipeline to consider non-reference sequence. We also need to update the QC step so it does not fail.

A pipeline w/t fix:
http://guihive.ebi.ac.uk:8080/versions/96/?driver=mysql&username=ensadmin&host=mysql-ens-var-prod-4&port=4694&dbname=snhossain_dump_vep_human_113&passwd=xxxxx

Copy link
Contributor

@likhitha-surapaneni likhitha-surapaneni left a comment

Choose a reason for hiding this comment

The reason will be displayed to describe this comment to others. Learn more.

Thanks @nakib103, qc is successful in the updated pipeline

@likhitha-surapaneni likhitha-surapaneni merged commit 9ac6dbd into Ensembl:main Jul 25, 2024
1 check passed
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants