Added example, fixed bug

EngreitzLab · Jun 17, 2021 · b9f5234 · b9f5234
1 parent 46db42d
commit b9f5234
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/workflow/rules/design_guides.smk b/workflow/rules/design_guides.smk
@@ -69,7 +69,7 @@ SKIP_SCORING=true"
 			print("Running: " + command)
 			proc_output = subprocess.check_output(command, shell=True) 
 		except subprocess.CalledProcessError as exc:
-			if 'filteredGuides.bed' in exc.output:
+			if 'filteredGuides.bed' in str(exc.output):
 				print("Snakemake caught Java Exception: Ignore this error, which is expected")
 				pass
 			else: