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Update README.md
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engreitz authored Jun 27, 2022
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Expand Up @@ -28,6 +28,10 @@ Then, the following filters are applied to remove gRNAs that match any of the fo
This code also allows providing a list of previously designed and scored gRNAs, so that new runs only need to design gRNAs for new regions.

## Genome builds

Currently the pipeline only works with hg19 and mm9, because we use a custom implementation of the MIT Specificity Score algorithm that is only available in those genome builds. This could be circumvented by switching to an alternative guide off-target scoring algorithm to support other genomes.

## Usage

### Step 1: Clone this github repository
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