Changes prd to PETSIRD and update module/CI #12

	name: CI

	on:
	push:
	branches: [main]
	paths-ignore:
	- '*/.md'
	pull_request:
	branches: [main]

	defaults:
	run:
	# See https://github.com/marketplace/actions/setup-miniconda#important
	shell: bash -el {0}

	jobs:
	validate:
	strategy:
	matrix:
	cppVersion: [17]

	name: Run tests
	runs-on: ubuntu-latest

	steps:
	- uses: actions/checkout@v4
	with: {submodules: recursive}
	- name: strip environment.yml
	run: \|
	cat environment.yml \| grep -v "#.*\<\local\>" > temp-ci-environment.yml
	- uses: conda-incubator/setup-miniconda@v3
	with:
	activate-environment: yardl
	environment-file: temp-ci-environment.yml
	- name: Install yardl
	run: \|
	rm temp-ci-environment.yml
	YARDL_DIR=${{github.workspace}}/yardl
	mkdir ${YARDL_DIR}
	YARDL_VERSION=0.6.2
	wget --quiet "https://github.com/microsoft/yardl/releases/download/v${YARDL_VERSION}/yardl_${YARDL_VERSION}_linux_x86_64.tar.gz"
	tar -xzf "yardl_${YARDL_VERSION}_linux_x86_64.tar.gz" -C "${YARDL_DIR}"
	rm "yardl_${YARDL_VERSION}_linux_x86_64.tar.gz"
	echo "${YARDL_DIR}" >> $GITHUB_PATH

	- name: Build model
	run: \|
	cd PETSIRD/model
	yardl generate

	- name: Python
	run: \|
	cd python
	python start.py

	- name: Cpp
	run: \|
	cd cpp && mkdir -p build && cd build
	cmake -G Ninja -S .. -DHDF5_ROOT="$CONDA_PREFIX"
	ninja

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