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@Dfam-consortium

Dfam Consortium

Resources for the Study of Transposable Element Families
README.md

Consortium Resources

This is the primary distribution and repository site for Dfam related projects. Each repository contains it's own set of focused documentation. Project level documentation will be made available in our new wiki site.

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  1. RepeatMasker RepeatMasker Public

    RepeatMasker is a program that screens DNA sequences for interspersed repeats and low complexity DNA sequences.

    Perl 314 51

  2. RepeatModeler RepeatModeler Public

    De-Novo Repeat Discovery Tool

    Perl 244 27

  3. TETools TETools Public

    Dfam Transposable Element Tools Docker container.

    Perl 106 16

  4. FamDB FamDB Public

    FamDB file format library and utilities

    Python 49 4

  5. AlignmentSummaryViewer AlignmentSummaryViewer Public

    Multiple sequence alignment visualization component

    HTML 7

  6. RepeatMasker_Nextflow RepeatMasker_Nextflow Public

    Nextflow script for running RepeatMasker on a cluster

    Perl 6 1

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