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ENH: Pad transect during inference #277

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merged 3 commits into from
Nov 7, 2022
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ENH: Pad transect during inference #277

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fba41ef
ENH: Add raw.manipulate.pad_transect
scottclowe Jan 29, 2022
0ab1028
MNT: Pad segments before applying model for inference
scottclowe Jan 29, 2022
89a3235
DOC: Add comment
scottclowe Nov 7, 2022
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MNT: Pad segments before applying model for inference
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@scottclowe
scottclowe committed Jan 29, 2022
commit 0ab10288fc69738c401200d78a7d5d390b9f4b82
3 changes: 2 additions & 1 deletion echofilter/inference.py
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Expand Up @@ -28,7 +28,7 @@
from echofilter.nn.wrapper import Echofilter
import echofilter.path
import echofilter.raw
from echofilter.raw.manipulate import join_transect, split_transect
from echofilter.raw.manipulate import join_transect, pad_transect, split_transect
from echofilter.raw.utils import fillholes2d
import echofilter.ui
import echofilter.ui.checkpoints
Expand Down Expand Up @@ -1297,6 +1297,7 @@ def inference_transect(
]
)
segment = transform(segment)
segment = pad_transect(segment)
input = torch.tensor(segment["signals"]).unsqueeze(0).unsqueeze(0)
input = input.to(device, dtype).contiguous()
# Put data through model
Expand Down