DILiS-lab

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1. SimbaML SimbaML Public

   SimbaML is an all-in-one framework for integrating prior knowledge of ODE models into the ML process by synthetic data augmentation. It allows for the convenient generation of realistic synthetic d…

   Python 8 3

2. DroPAU DroPAU Public

   Identifying Drivers of Predictive Aleatoric Uncertainty

   Jupyter Notebook 4

3. pepermint pepermint Public

   Graph Neural Network for Peptide Abundance Imputation in MS Proteomics Data

   Jupyter Notebook 3

4. opt-synthdata-4tl opt-synthdata-4tl Public

   This is the code repository for the paper "Optimizing ODE-derived Synthetic Data for Transfer Learning in Dynamical Biological Systems".

   Jupyter Notebook 3 2

5. CombDNF CombDNF Public

   Python 3 1

6. pyproteonet pyproteonet Public

   Python package for imputation, peptide-to-protein aggregation as well as in silico data creation of proteomics data with a specific focus on the development and evaluation of imputation methods in …

   Python 2