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CreMoProduction/README.md

👋 Hi, I'm Alex Ilchenko!

🚀 About Me

  • 🎓 PhD in Biochemistry focused on Metabolomics and Data Analysis.
  • 🌱 I’m currently learning advanced statistical methods and machine learning techniques for metabolomics data analysis.
  • 👯 I’m open to collaborate on projects involving metabolomics data processing, statistical analysis, and software development.
  • 📫 How to reach me: aleks.delta2013@gmail.com

🛠️ Technologies & Tools

Multivariate Data Analysis (MVDA)

  • Multivariate techniques (PCA, PLS, HCA, Discriminant Analysis)
  • Data reduction and dimensionality reduction for large-scale datasets (e.g., GC/LC-MS/MS)
  • Interpreting multivariate results to explain biological variance, identify biomarkers, and predict outcomes
  • Using advanced tools (SIMCA, R, Python) for multivariate data processing and visualization

Data Processing and Interpretation

  • Data preprocessing (normalization, scaling, transformation)
  • Integrating univariate and multivariate approaches for comprehensive data analysis
  • Reporting and presenting complex analysis results through scientific reports, publications, and visual dashboards

Software development

  • Python, tkinter, plotly, matplotlib, pandas, numpy, R, ggplot2, git, JSON handling, JavaScript, Adobe API, etc

Top Languages GitHub Streak
Top Languages GitHub Streak

Feel free to explore my repositories and reach out if you have any questions or collaboration ideas!

Pinned Loading

  1. Metabolites-Cleaner Metabolites-Cleaner Public

    R scripts that remove unwanted metabolites from NIST file and xlsx table and cleans metabolite names

    R 2

  2. sirius-profinder sirius-profinder Public

    Annotate LC-MS extracted molecular features of untargeted Agilent Mass Hunter ProFinder processing using SIRIUS software of analysis LC-MS/MS

    R

  3. nistAutoSearch nistAutoSearch Public

    Performs library searches against electron ionization mass spectral (EI-MS) databases using the API NIST MS Search

    R