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added the argument for SeqlevelsStyle and trackline in bedgraph #19

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merged 2 commits into from
Mar 31, 2020

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ClarissaFeuersteinAkgoz
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I used write_bedgraphs, but realized two issues that were bothering me:
1- the created file was called bedgraph, but did not include the trackline.
2- my data has the seqlevelsStyle of NCBI but I needed UCSC style for uploading files for visualization in the UCSC browser.

so I have two suggested change in the function, where:

  1. you can select the SeqlevelsStyle you want to have in the bedgraph file.
  2. It adds the trackline within the bedgraph

Best :)
P.S.: changes in the description of the function are still missing.

added the argument for SeqlevelsStyle and trackline in bedgraph
@PoisonAlien PoisonAlien merged commit 503bbf1 into CompEpigen:master Mar 31, 2020
@PoisonAlien
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Thank you @ClarissaFeuersteinAkgoz !

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