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Merge pull request #3436 from CliMA/ck/up_deps2
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Update compats and dependencies
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charleskawczynski authored Nov 14, 2024
2 parents 3c2e640 + 4f052cf commit ac0e8fd
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71 changes: 43 additions & 28 deletions docs/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -87,12 +87,6 @@ git-tree-sha1 = "e81c509d2c8e49592413bfb0bb3b08150056c79d"
uuid = "27a7e980-b3e6-11e9-2bcd-0b925532e340"
version = "0.4.1"

[[deps.Aqua]]
deps = ["Compat", "Pkg", "Test"]
git-tree-sha1 = "49b1d7a9870c87ba13dc63f8ccfcf578cb266f95"
uuid = "4c88cf16-eb10-579e-8560-4a9242c79595"
version = "0.8.9"

[[deps.ArgParse]]
deps = ["Logging", "TextWrap"]
git-tree-sha1 = "22cf435ac22956a7b45b0168abbc871176e7eecc"
Expand Down Expand Up @@ -277,9 +271,9 @@ version = "1.0.1+0"

[[deps.Cairo]]
deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"]
git-tree-sha1 = "7b6ad8c35f4bc3bca8eb78127c8b99719506a5fb"
git-tree-sha1 = "71aa551c5c33f1a4415867fe06b7844faadb0ae9"
uuid = "159f3aea-2a34-519c-b102-8c37f9878175"
version = "1.1.0"
version = "1.1.1"

[[deps.CairoMakie]]
deps = ["CRC32c", "Cairo", "Cairo_jll", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"]
Expand Down Expand Up @@ -366,9 +360,9 @@ version = "0.7.38"

[[deps.ClimaUtilities]]
deps = ["Artifacts", "Dates"]
git-tree-sha1 = "7e024b52c3a6713680665b3cc9f6cb9b872db357"
git-tree-sha1 = "f99f60059af1de49a24d16049dfa8d65e3d3907d"
uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
version = "0.1.17"
version = "0.1.18"

[deps.ClimaUtilities.extensions]
ClimaUtilitiesClimaCommsCUDAExt = ["ClimaComms", "CUDA"]
Expand Down Expand Up @@ -569,10 +563,10 @@ uuid = "8bb1440f-4735-579b-a4ab-409b98df4dab"
version = "1.9.1"

[[deps.DiffEqBase]]
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
git-tree-sha1 = "f8eefbb7e910f59087c4bb09ce670f235758ee4a"
deps = ["ArrayInterface", "ConcreteStructs", "DataStructures", "DocStringExtensions", "EnumX", "EnzymeCore", "FastBroadcast", "FastClosures", "FastPower", "ForwardDiff", "FunctionWrappers", "FunctionWrappersWrappers", "LinearAlgebra", "Logging", "Markdown", "MuladdMacro", "Parameters", "PreallocationTools", "PrecompileTools", "Printf", "RecursiveArrayTools", "Reexport", "SciMLBase", "SciMLOperators", "SciMLStructures", "Setfield", "Static", "StaticArraysCore", "Statistics", "TruncatedStacktraces"]
git-tree-sha1 = "697abdf4af0e38199e9eabff6ccdf65255de855d"
uuid = "2b5f629d-d688-5b77-993f-72d75c75574e"
version = "6.158.3"
version = "6.159.0"

[deps.DiffEqBase.extensions]
DiffEqBaseCUDAExt = "CUDA"
Expand Down Expand Up @@ -648,9 +642,9 @@ version = "0.9.3"

[[deps.Documenter]]
deps = ["ANSIColoredPrinters", "AbstractTrees", "Base64", "CodecZlib", "Dates", "DocStringExtensions", "Downloads", "Git", "IOCapture", "InteractiveUtils", "JSON", "LibGit2", "Logging", "Markdown", "MarkdownAST", "Pkg", "PrecompileTools", "REPL", "RegistryInstances", "SHA", "TOML", "Test", "Unicode"]
git-tree-sha1 = "5a1ee886566f2fa9318df1273d8b778b9d42712d"
git-tree-sha1 = "d0ea2c044963ed6f37703cead7e29f70cba13d7e"
uuid = "e30172f5-a6a5-5a46-863b-614d45cd2de4"
version = "1.7.0"
version = "1.8.0"

[[deps.DocumenterCitations]]
deps = ["AbstractTrees", "Bibliography", "Dates", "Documenter", "Logging", "Markdown", "MarkdownAST", "OrderedCollections", "Unicode"]
Expand All @@ -675,9 +669,9 @@ uuid = "4e289a0a-7415-4d19-859d-a7e5c4648b56"
version = "1.0.4"

[[deps.EnzymeCore]]
git-tree-sha1 = "04c777af6ef65530a96ab68f0a81a4608113aa1d"
git-tree-sha1 = "e333ffd38ecffcf5c6c2dafd10788404ac46fb9f"
uuid = "f151be2c-9106-41f4-ab19-57ee4f262869"
version = "0.8.5"
version = "0.8.6"
weakdeps = ["Adapt"]

[deps.EnzymeCore.extensions]
Expand Down Expand Up @@ -751,6 +745,27 @@ git-tree-sha1 = "fd923962364b645f3719855c88f7074413a6ad92"
uuid = "442a2c76-b920-505d-bb47-c5924d526838"
version = "1.0.2"

[[deps.FastPower]]
git-tree-sha1 = "58c3431137131577a7c379d00fea00be524338fb"
uuid = "a4df4552-cc26-4903-aec0-212e50a0e84b"
version = "1.1.1"

[deps.FastPower.extensions]
FastPowerEnzymeExt = "Enzyme"
FastPowerForwardDiffExt = "ForwardDiff"
FastPowerMeasurementsExt = "Measurements"
FastPowerMonteCarloMeasurementsExt = "MonteCarloMeasurements"
FastPowerReverseDiffExt = "ReverseDiff"
FastPowerTrackerExt = "Tracker"

[deps.FastPower.weakdeps]
Enzyme = "7da242da-08ed-463a-9acd-ee780be4f1d9"
ForwardDiff = "f6369f11-7733-5829-9624-2563aa707210"
Measurements = "eff96d63-e80a-5855-80a2-b1b0885c5ab7"
MonteCarloMeasurements = "0987c9cc-fe09-11e8-30f0-b96dd679fdca"
ReverseDiff = "37e2e3b7-166d-5795-8a7a-e32c996b4267"
Tracker = "9f7883ad-71c0-57eb-9f7f-b5c9e6d3789c"

[[deps.FastRounding]]
deps = ["ErrorfreeArithmetic", "LinearAlgebra"]
git-tree-sha1 = "6344aa18f654196be82e62816935225b3b9abe44"
Expand All @@ -759,9 +774,9 @@ version = "0.3.1"

[[deps.FileIO]]
deps = ["Pkg", "Requires", "UUIDs"]
git-tree-sha1 = "62ca0547a14c57e98154423419d8a342dca75ca9"
git-tree-sha1 = "91e0e5c68d02bcdaae76d3c8ceb4361e8f28d2e9"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.16.4"
version = "1.16.5"

[[deps.FilePaths]]
deps = ["FilePathsBase", "MacroTools", "Reexport", "Requires"]
Expand Down Expand Up @@ -836,9 +851,9 @@ version = "2.13.2+0"

[[deps.FreeTypeAbstraction]]
deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"]
git-tree-sha1 = "84dfe824bd6fdf2a5d73bb187ff31b5549b2a79c"
git-tree-sha1 = "77e2b094e61d939f9626181ab23d0b76e78f9fd3"
uuid = "663a7486-cb36-511b-a19d-713bb74d65c9"
version = "0.10.4"
version = "0.10.5"

[[deps.FriBidi_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
Expand Down Expand Up @@ -1025,10 +1040,10 @@ uuid = "c817782e-172a-44cc-b673-b171935fbb9e"
version = "0.1.7"

[[deps.ImageCore]]
deps = ["Aqua", "BlockArrays", "ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"]
git-tree-sha1 = "661ca04f8df633e8a021c55a22e96cf820220ede"
deps = ["ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"]
git-tree-sha1 = "8c193230235bbcee22c8066b0374f63b5683c2d3"
uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534"
version = "0.10.4"
version = "0.10.5"

[[deps.ImageIO]]
deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs", "WebP"]
Expand Down Expand Up @@ -2200,9 +2215,9 @@ weakdeps = ["ClimaParams"]

[[deps.SymbolicIndexingInterface]]
deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
git-tree-sha1 = "20cf607cafb31f922bce84d60379203e7a126911"
git-tree-sha1 = "6c6761e08bf5a270905cdd065be633abfa1b155b"
uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
version = "0.3.34"
version = "0.3.35"

[[deps.TOML]]
deps = ["Dates"]
Expand Down Expand Up @@ -2370,9 +2385,9 @@ version = "0.2.1"

[[deps.VectorInterface]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "7cab92153022a72d4534262cc15a96e21223e3f9"
git-tree-sha1 = "cea8abaa6e43f72f97a09cf95b80c9eb53ff75cf"
uuid = "409d34a3-91d5-4945-b6ec-7529ddf182d8"
version = "0.4.8"
version = "0.4.9"

[[deps.WebP]]
deps = ["CEnum", "ColorTypes", "FileIO", "FixedPointNumbers", "ImageCore", "libwebp_jll"]
Expand Down
44 changes: 24 additions & 20 deletions examples/Manifest.toml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@

julia_version = "1.10.6"
manifest_format = "2.0"
project_hash = "8fc0a28be2d59204b24addc96ac4d34bf8655ff1"
project_hash = "b0cd3fa0e3153549529fa43102bd0bdae16ff23d"

[[deps.ADTypes]]
git-tree-sha1 = "eea5d80188827b35333801ef97a40c2ed653b081"
Expand Down Expand Up @@ -200,9 +200,13 @@ version = "0.1.6"

[[deps.BlockArrays]]
deps = ["ArrayLayouts", "FillArrays", "LinearAlgebra"]
git-tree-sha1 = "9a9610fbe5779636f75229e423e367124034af41"
git-tree-sha1 = "d434647f798823bcae510aee0bc0401927f64391"
uuid = "8e7c35d0-a365-5155-bbbb-fb81a777f24e"
version = "0.16.43"
version = "1.1.1"
weakdeps = ["BandedMatrices"]

[deps.BlockArrays.extensions]
BlockArraysBandedMatricesExt = "BandedMatrices"

[[deps.Blosc_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl", "Lz4_jll", "Zlib_jll", "Zstd_jll"]
Expand Down Expand Up @@ -280,9 +284,9 @@ version = "0.15.3+0"

[[deps.Cairo]]
deps = ["Cairo_jll", "Colors", "Glib_jll", "Graphics", "Libdl", "Pango_jll"]
git-tree-sha1 = "7b6ad8c35f4bc3bca8eb78127c8b99719506a5fb"
git-tree-sha1 = "71aa551c5c33f1a4415867fe06b7844faadb0ae9"
uuid = "159f3aea-2a34-519c-b102-8c37f9878175"
version = "1.1.0"
version = "1.1.1"

[[deps.CairoMakie]]
deps = ["CRC32c", "Cairo", "Colors", "FileIO", "FreeType", "GeometryBasics", "LinearAlgebra", "Makie", "PrecompileTools"]
Expand Down Expand Up @@ -337,10 +341,10 @@ weakdeps = ["CUDA", "MPI"]
ClimaCommsMPIExt = "MPI"

[[deps.ClimaCore]]
deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "DocStringExtensions", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "Unrolled"]
git-tree-sha1 = "c5110de141034f18511a9d09b409f9dd568b83ee"
deps = ["Adapt", "BandedMatrices", "BlockArrays", "ClimaComms", "CubedSphere", "DataStructures", "ForwardDiff", "GaussQuadrature", "GilbertCurves", "HDF5", "InteractiveUtils", "IntervalSets", "KrylovKit", "LinearAlgebra", "MultiBroadcastFusion", "NVTX", "PkgVersion", "RecursiveArrayTools", "RootSolvers", "SparseArrays", "StaticArrays", "Statistics", "Unrolled"]
git-tree-sha1 = "7632911d7b09fb3e067984626b07b3eb1113e55e"
uuid = "d414da3d-4745-48bb-8d80-42e94e092884"
version = "0.14.19"
version = "0.14.20"
weakdeps = ["CUDA", "Krylov"]

[deps.ClimaCore.extensions]
Expand Down Expand Up @@ -413,9 +417,9 @@ version = "0.7.38"

[[deps.ClimaUtilities]]
deps = ["Artifacts", "Dates"]
git-tree-sha1 = "7e024b52c3a6713680665b3cc9f6cb9b872db357"
git-tree-sha1 = "f99f60059af1de49a24d16049dfa8d65e3d3907d"
uuid = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
version = "0.1.17"
version = "0.1.18"
weakdeps = ["Adapt", "CUDA", "ClimaComms", "ClimaCore", "ClimaCoreTempestRemap", "Interpolations", "NCDatasets"]

[deps.ClimaUtilities.extensions]
Expand Down Expand Up @@ -791,9 +795,9 @@ version = "0.3.1"

[[deps.FileIO]]
deps = ["Pkg", "Requires", "UUIDs"]
git-tree-sha1 = "62ca0547a14c57e98154423419d8a342dca75ca9"
git-tree-sha1 = "91e0e5c68d02bcdaae76d3c8ceb4361e8f28d2e9"
uuid = "5789e2e9-d7fb-5bc7-8068-2c6fae9b9549"
version = "1.16.4"
version = "1.16.5"

[[deps.FilePaths]]
deps = ["FilePathsBase", "MacroTools", "Reexport", "Requires"]
Expand Down Expand Up @@ -868,9 +872,9 @@ version = "2.13.2+0"

[[deps.FreeTypeAbstraction]]
deps = ["ColorVectorSpace", "Colors", "FreeType", "GeometryBasics"]
git-tree-sha1 = "84dfe824bd6fdf2a5d73bb187ff31b5549b2a79c"
git-tree-sha1 = "77e2b094e61d939f9626181ab23d0b76e78f9fd3"
uuid = "663a7486-cb36-511b-a19d-713bb74d65c9"
version = "0.10.4"
version = "0.10.5"

[[deps.FriBidi_jll]]
deps = ["Artifacts", "JLLWrappers", "Libdl"]
Expand Down Expand Up @@ -1055,9 +1059,9 @@ version = "0.1.7"

[[deps.ImageCore]]
deps = ["ColorVectorSpace", "Colors", "FixedPointNumbers", "MappedArrays", "MosaicViews", "OffsetArrays", "PaddedViews", "PrecompileTools", "Reexport"]
git-tree-sha1 = "b219503865f42a12ad20ea67082e0fdb69b73ad9"
git-tree-sha1 = "8c193230235bbcee22c8066b0374f63b5683c2d3"
uuid = "a09fc81d-aa75-5fe9-8630-4744c3626534"
version = "0.10.3"
version = "0.10.5"

[[deps.ImageIO]]
deps = ["FileIO", "IndirectArrays", "JpegTurbo", "LazyModules", "Netpbm", "OpenEXR", "PNGFiles", "QOI", "Sixel", "TiffImages", "UUIDs", "WebP"]
Expand Down Expand Up @@ -2327,9 +2331,9 @@ weakdeps = ["ClimaParams"]

[[deps.SymbolicIndexingInterface]]
deps = ["Accessors", "ArrayInterface", "RuntimeGeneratedFunctions", "StaticArraysCore"]
git-tree-sha1 = "20cf607cafb31f922bce84d60379203e7a126911"
git-tree-sha1 = "6c6761e08bf5a270905cdd065be633abfa1b155b"
uuid = "2efcf032-c050-4f8e-a9bb-153293bab1f5"
version = "0.3.34"
version = "0.3.35"

[[deps.TOML]]
deps = ["Dates"]
Expand Down Expand Up @@ -2485,9 +2489,9 @@ version = "1.0.1"

[[deps.VectorInterface]]
deps = ["LinearAlgebra"]
git-tree-sha1 = "7cab92153022a72d4534262cc15a96e21223e3f9"
git-tree-sha1 = "cea8abaa6e43f72f97a09cf95b80c9eb53ff75cf"
uuid = "409d34a3-91d5-4945-b6ec-7529ddf182d8"
version = "0.4.8"
version = "0.4.9"

[[deps.WebP]]
deps = ["CEnum", "ColorTypes", "FileIO", "FixedPointNumbers", "ImageCore", "libwebp_jll"]
Expand Down
3 changes: 0 additions & 3 deletions examples/Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,6 @@
ArgParse = "c7e460c6-2fb9-53a9-8c5b-16f535851c63"
ArtifactWrappers = "a14bc488-3040-4b00-9dc1-f6467924858a"
AtmosphericProfilesLibrary = "86bc3604-9858-485a-bdbe-831ec50de11d"
BlockArrays = "8e7c35d0-a365-5155-bbbb-fb81a777f24e"
CUDA = "052768ef-5323-5732-b1bb-66c8b64840ba"
CairoMakie = "13f3f980-e62b-5c42-98c6-ff1f3baf88f0"
ClimaAnalysis = "29b5916a-a76c-4e73-9657-3c8fd22e65e6"
Expand All @@ -20,7 +19,6 @@ ClimaReproducibilityTests = "e0c89595-00ba-42a9-9f9b-061ef3dc23a1"
ClimaTimeSteppers = "595c0a79-7f3d-439a-bc5a-b232dc3bde79"
ClimaUtilities = "b3f4f4ca-9299-4f7f-bd9b-81e1242a7513"
CloudMicrophysics = "6a9e3e04-43cd-43ba-94b9-e8782df3c71b"
Colors = "5ae59095-9a9b-59fe-a467-6f913c188581"
Dates = "ade2ca70-3891-5945-98fb-dc099432e06a"
DiffEqBase = "2b5f629d-d688-5b77-993f-72d75c75574e"
DocStringExtensions = "ffbed154-4ef7-542d-bbb7-c09d3a79fcae"
Expand Down Expand Up @@ -63,7 +61,6 @@ Thermodynamics = "b60c26fb-14c3-4610-9d3e-2d17fe7ff00c"
YAML = "ddb6d928-2868-570f-bddf-ab3f9cf99eb6"

[compat]
BlockArrays = "0.16"
CairoMakie = "0.10, 0.11"
ClimaAnalysis = "0.5.7"
ClimaCoreMakie = "0.3, 0.4"
Expand Down
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