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  1. Private_Projects_Showcase Private_Projects_Showcase Public

    Click here to check my projects whose code is currently private. Contact me freely if anything interests you or you have questions.

  2. Dynamic_Graphs_with_Pygame Dynamic_Graphs_with_Pygame Public

    This is a python library created using pygame that manages the creation of graphs that update dynamically displaying the changes of x and y over time.

    Python

  3. ATLAS-Cellpose ATLAS-Cellpose Public

    Created by Christos Botos, ATLAS-Cellpose (Adaptive Tiled Local Analysis Segmentation for Cellpose) is a tool developed at the Human Genetics Department of LUMC. It improves cell and nuclei segment…

    Python 1

  4. vitseg vitseg Public

    A Vision Transformer pipeline for unsupervised tissue-region discovery in kidney microscopy. It extracts multi-scale DINO ViT-S/16 embeddings from nuclei segmentation masks, clusters them with Mini…

    Python

  5. scRNAseq-cNMF-RF-LODO-Classifier scRNAseq-cNMF-RF-LODO-Classifier Public

    Unserpervised cNMF gene programs were used to ml-classify diabetic single-cells using LODO to deal with donor identity effects.

    Python 1