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In previous commits, I added CLI paramters for overriding the default output compression and pyramid levels settings for ome-zarr output. This commit hooks those options up to the GUI as well and displays them only when ome-zarr output is selected.

Tested by:

  • ./run_gui
  • choose an input image, override compression to none and pyramid levels to 3
  • click the button to stitch the output
  • see that it succeeds
  • examine the output, see there are only three levels (normally for my test image there would be 6)
  • see that level 0 is larger in size than a previous attempt (since it's uncompressed)
  • repeat with ome-tiff, see that the extra options disappear
  • see that ome-tiff stitching still works normally

In previous commits, I added CLI paramters for overriding the default
output compression and pyramid levels settings for ome-zarr output. This
commit hooks those options up to the GUI as well and displays them only
when ome-zarr output is selected.

Tested by:
- `./run_gui`
- choose an input image, override compression to none and pyramid levels
  to 3
- click the button to stitch the output
- see that it succeeds
- examine the output, see there are only three levels (normally for my
  test image there would be 6)
- see that level 0 is larger in size than a previous attempt (since it's
  uncompressed)
- repeat with ome-tiff, see that the extra options disappear
- see that ome-tiff stitching still works normally
@cjfuller cjfuller requested a review from hongquanli January 21, 2025 22:39
@cjfuller cjfuller merged commit 9ff2365 into main Jan 21, 2025
@cjfuller cjfuller deleted the colin/gui_compression_and_pyramid branch January 21, 2025 22:40
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2 participants