Add setup and install scripts for the GUI #17
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For ease of use, we'd prefer not to have people run a bunch of terminal commands manually. In contrast to the main microscope software, we'd also like to keep this tool isolated in a virtualenv to reduce the chance that analysis tools can break the microscope software. This commit adds some setup scripts that can help do this: - `setup_ubuntu_22_04.sh` there's a bunch of extra system dependencies we need on ubuntu (mostly for QT); this installs them automatically. I chose ubuntu 22 since it's the same OS the microscope software installation script targets. - `dev/ensure_uv.sh` a wrapper around the installer for uv, which we use to manage the virtualenvs, python installation, and python dependencies - `run_gui` ensures that uv is installed by calling into `dev/ensure_uv.sh` and then runs the GUI command. This is also double-clickable on mac (and presumably linux, though I don't have a non-containerized ubuntu 22.04 installation to test on) Tested by: - create a fresh ubuntu 22.04 container - `./setup_ubuntu_22_04.sh` - `./run_gui` - see these succeed, I get the stitching gui, and can stitch some images - double click `run_gui` on mac, see I get the stitching gui and can stitch some images
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For ease of use, we'd prefer not to have people run a bunch of terminal commands manually. In contrast to the main microscope software, we'd also like to keep this tool isolated in a virtualenv to reduce the chance that analysis tools can break the microscope software.
This commit adds some setup scripts that can help do this:
setup_ubuntu_22_04.shthere's a bunch of extra system dependencies we need on ubuntu (mostly for QT); this installs them automatically. I chose ubuntu 22 since it's the same OS the microscope software installation script targets.dev/ensure_uv.sha wrapper around the installer for uv, which we use to manage the virtualenvs, python installation, and python dependenciesrun_guiensures that uv is installed by calling intodev/ensure_uv.shand then runs the GUI command. This is also double-clickable on mac (and presumably linux, though I don't have a non-containerized ubuntu 22.04 installation to test on)Tested by:
./setup_ubuntu_22_04.sh./run_guirun_guion mac, see I get the stitching gui and can stitch some images