just need a main test and write tests and all with minimal cov

CNuge · Mar 11, 2020 · 1734e00 · 1734e00
1 parent a67a605
commit 1734e00
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Showing 2 changed files with 3 additions and 2 deletions.
diff --git a/alfie/__pycache__/alf.cpython-37.pyc b/alfie/__pycache__/alf.cpython-37.pyc
diff --git a/alfie/tests/test_seqio.py b/alfie/tests/test_seqio.py
@@ -25,8 +25,7 @@ def test_file_type():
 		file_type("in.file_2.csv")
 
 
-#the tmpdir avoids making a directory
-def test_outfile_builder(tmpdir):
+def test_outfile_builder():
 	"""Test that the output file set is generated properly."""
 	expected_kingdom_dict1 = {0: 'alfie_out/animalia_test.fasta',
 						 1: 'alfie_out/bacteria_test.fasta',
@@ -46,6 +45,8 @@ def test_outfile_builder(tmpdir):
 	out2 = outfile_dict("in_data/test.fastq", folder_prefix = 'diff_place/') 
 	assert out2 == expected_kingdom_dict2
 
+	os.rmdir("alfie_out")
+	os.rmdir("diff_place")
 
 def test_fasta_reader():
 	""" Test the fasta reader functions."""