need some research on testing main and write files

CNuge · Mar 11, 2020 · 0c4c1a4 · 0c4c1a4
1 parent c5e818a
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Showing 4 changed files with 1 addition and 11 deletions.
diff --git a/alfie/tests/__pycache__/test_script.cpython-37-pytest-5.2.1.pyc b/alfie/tests/__pycache__/test_script.cpython-37-pytest-5.2.1.pyc
diff --git a/alfie/tests/__pycache__/test_seqio.cpython-37-pytest-5.2.1.pyc b/alfie/tests/__pycache__/test_seqio.cpython-37-pytest-5.2.1.pyc
diff --git a/alfie/tests/test_script.py b/alfie/tests/test_script.py
@@ -24,11 +24,3 @@ def test_argparser():
 	assert out2.classes == 'kingdoms'
 
 
-def test_cli_script():
-	""" pass different argument sets to the main function and test behavior."""
-
-	#error if no file specified
-	with pytest.raises(ValueError):
-		alf.main()
-
-	#need to do a setup?
diff --git a/alfie/tests/test_seqio.py b/alfie/tests/test_seqio.py
@@ -1,6 +1,3 @@
-
-#import os 
-
 import os
 import types
 import pytest
@@ -51,6 +48,7 @@ def test_outfile_builder():
 	os.rmdir("alfie_out")
 	os.rmdir("diff_place")
 
+
 def test_fasta_reader():
 	""" Test the fasta reader functions."""
 	fasta_read = read_fasta(ex_fasta_file)