Add Github Actions test-cice.yml script (#555)

* add Github Actions test-cice.yml script

* Update README.md

Co-authored-by: Philippe Blain <levraiphilippeblain@gmail.com>

.github/workflows/test-cice.yml

@@ -0,0 +1,135 @@
+name: GHActions
+
+# This workflow is triggered on pushes, pull-requeust, and releases
+# ghactions* branch names will trigger this to support development testing
+# To Do: get it working with bash and ubuntu
+
+on:
+  push:
+    branches:
+      - master
+      - 'CICE*'
+      - 'ghactions*'
+  pull_request:
+  release:
+    types:
+      - created
+
+defaults:
+  run:
+    shell: /bin/csh {0}
+
+jobs:
+  build:
+    name: "CICETesting"
+    runs-on: ${{ matrix.os }}
+    strategy:
+      matrix:
+#        os: [macos-latest, ubuntu-latest]
+        os: [macos-latest]
+#        os: [ubuntu-latest]
+        include: 
+          - os: macos-latest
+            envdef: macos
+            minicond: Miniconda3-latest-MacOSX-x86_64.sh
+#          - os: ubuntu-latest
+#            envdef: linux
+#            minicond: Miniconda3-latest-Linux-x86_64.sh
+    steps:
+      - name: reset macos toolchain to commandlinetools
+        shell: /bin/bash {0}
+        if: contains( matrix.envdef, 'macos')
+        run: |
+          sudo xcode-select -r
+          sudo xcode-select -s /Library/Developer/CommandLineTools
+          echo "xcrun --show-sdk-path: $(xcrun --show-sdk-path)"
+          echo "xcode-select -p: $(xcode-select -p)"
+      - name: system info
+        shell: /bin/bash {0}
+        run: |
+          type wget
+          type curl
+          type csh
+          echo "readlink \$(which csh): $(python -c 'import os, sys; print os.path.realpath(sys.argv[1])' $(which csh))"
+          echo "csh --version: $(csh --version)"
+          echo "uname -a: $(uname -a)"
+          echo "sw_vers: $(sw_vers)"
+          echo "HOME: $HOME"
+          echo "GITHUB_WORKSPACE: $GITHUB_WORKSPACE"
+          echo "OS: ${{ matrix.os }}"
+          echo "ENVDEF: ${{ matrix.envdef }}"
+          echo "MINICOND: ${{ matrix.minicond }}"
+      - name : install miniconda
+        shell: /bin/bash {0}
+        run: |
+          wget https://repo.anaconda.com/miniconda/${{ matrix.minicond }} -O ~/miniconda.sh
+          bash ~/miniconda.sh -b -p $HOME/miniconda
+      - name: clone
+        uses: actions/checkout@v2
+        with:
+          submodules: 'recursive'
+      - name: link
+        run: |
+           ln -s ${GITHUB_WORKSPACE}/../CICE ${HOME}/cice
+#           ls -al ${HOME}/
+#           ls -al ${GITHUB_WORKSPACE}/
+      - name: setup conda env
+        shell: /bin/bash {0}
+        run: |
+          cd $HOME && mkdir -p cice-dirs/runs cice-dirs/baseline cice-dirs/input
+          source $HOME/miniconda/bin/activate
+          conda init tcsh
+          cd $HOME/cice
+          conda env create -f configuration/scripts/machines/environment.yml
+      - name: check conda env
+        run: |
+          conda activate cice && which mpicc && which mpifort && which make
+          mpifort --version
+          mpicc --version
+          make --version
+      - name: check setup case
+        run: |
+          cd $HOME/cice
+          ./cice.setup -m conda -e ${{ matrix.envdef }} -c case0 --pes 1x1 -s diag1
+      - name: check setup test
+        run: |
+          cd $HOME/cice
+          ./cice.setup -m conda -e ${{ matrix.envdef }} --test smoke --testid c0
+#      - name: compile case
+#        run: |
+#          cd $HOME/cice
+#          ./cice.setup -m conda -e ${{ matrix.envdef }} -c case1
+#          cd case1
+#          ./cice.build
+      - name: download input data
+        run: |
+          cd $HOME/cice-dirs/input
+          wget https://zenodo.org/record/3728358/files/CICE_data_gx3_grid_ic-20200320.tar.gz && tar xvfz CICE_data_gx3_grid_ic-20200320.tar.gz
+          wget https://zenodo.org/record/3728362/files/CICE_data_gx3_forcing_NCAR_bulk-20200320.tar.gz && tar xvfz CICE_data_gx3_forcing_NCAR_bulk-20200320.tar.gz
+          wget https://zenodo.org/record/3728364/files/CICE_data_gx3_forcing_JRA55-20200320.tar.gz && tar xvfz CICE_data_gx3_forcing_JRA55-20200320.tar.gz
+          pwd
+          ls -alR
+#      - name: run case
+#        run: |
+#          cd $HOME/cice
+#          cd case1
+#          ./cice.run
+      - name: run suite
+        run: |
+          cd $HOME/cice
+          ./cice.setup -m conda -e ${{ matrix.envdef }} --suite travis_suite --testid ${{ matrix.os }}
+      - name: write output
+        run: |
+          cd $HOME/cice
+          ./.github/workflows/write_logfiles.csh
+          cd testsuite.${{ matrix.os }}
+          ./results.csh
+      - name: successful run
+        if: ${{ success() }}
+        run: |
+          echo "${{ job.name }} PASSED"
+      - name: trap failure
+        if: ${{ failure() }}
+        run: |
+          echo "${{ job.name }} FAILED"
+          exit 99

.github/workflows/write_logfiles.csh

@@ -0,0 +1,10 @@
+#!/bin/csh 
+
+#echo "hello"
+
+foreach logfile (case*/logs/cice.runlog* testsuite.*/*/logs/cice.runlog*)
+  echo "### ${logfile} ###"
+  tail -20 $logfile
+  echo " "
+end
+

README.md

@@ -1,4 +1,5 @@
-[![Build Status](https://travis-ci.org/CICE-Consortium/CICE.svg?branch=master)](https://travis-ci.org/CICE-Consortium/CICE)
+[![Travis-CI](https://travis-ci.org/CICE-Consortium/CICE.svg?branch=master)](https://travis-ci.org/CICE-Consortium/CICE)
+[![GHActions](https://github.com/CICE-Consortium/CICE/workflows/GHActions/badge.svg)](https://github.com/CICE-Consortium/CICE/actions)
 [![Documentation Status](https://readthedocs.org/projects/cice-consortium-cice/badge/?version=master)](http://cice-consortium-cice.readthedocs.io/en/master/?badge=master)
 [![lcov](https://img.shields.io/endpoint?url=https://apcraig.github.io/coverage.json)](https://apcraig.github.io)