HighFive_Integration_tests #1006
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| name: HighFive_Integration_tests | |
| on: | |
| push: | |
| branches: | |
| - ci_test | |
| pull_request: | |
| branches: | |
| - main | |
| schedule: | |
| - cron: '5 3 * * *' | |
| repository_dispatch: | |
| types: [merge] # event_type set in HighFive integration_trigger.yml | |
| workflow_dispatch: | |
| inputs: | |
| highfive_branch: | |
| description: "HighFive branch to test against" | |
| required: false | |
| default: "v2.x" | |
| type: string | |
| libsonata_branch: | |
| description: "Libsonata branch to test" | |
| required: false | |
| default: "master" | |
| type: string | |
| env: | |
| BUILD_TYPE: RelWithDebInfo | |
| INSTALL_DIR: ${{github.workspace}}/install | |
| jobs: | |
| Integration: | |
| runs-on: ubuntu-latest | |
| env: | |
| HIGHFIVE_BRANCH: ${{ github.event.inputs.highfive_branch }} | |
| LIBSONATA_BRANCH: ${{ github.event.inputs.libsonata_branch }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: "Install libraries" | |
| run: sudo apt-get update && sudo apt-get install libboost-all-dev libhdf5-dev libeigen3-dev | |
| - name: Build HighFive | |
| run: | | |
| HIGHFIVE_BRANCH=${HIGHFIVE_BRANCH:-"v2.x"} | |
| git clone https://github.com/BlueBrain/HighFive.git \ | |
| --branch ${HIGHFIVE_BRANCH} --recursive | |
| cd HighFive | |
| CMAKE_OPTIONS=(-DHIGHFIVE_EXAMPLES:BOOL=False \ | |
| -DHIGHFIVE_UNIT_TESTS:BOOL=False \ | |
| -DCMAKE_BUILD_TYPE=$BUILD_TYPE \ | |
| -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR \ | |
| -DHIGHFIVE_USE_EIGEN:BOOL=True) | |
| source $GITHUB_WORKSPACE/ci/build.sh | |
| - name: Build and Test MorphIO | |
| run: | | |
| git clone https://github.com/BlueBrain/MorphIO.git --recursive | |
| cd MorphIO | |
| CMAKE_OPTIONS=(-DCMAKE_BUILD_TYPE=$BUILD_TYPE \ | |
| -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR \ | |
| -DEXTERNAL_HIGHFIVE:BOOL=True) | |
| source $GITHUB_WORKSPACE/ci/build.sh | |
| cd build && ctest --output-on-failure | |
| - name: Build and Test libsonata | |
| if: success() || failure() | |
| run: | | |
| HIGHFIVE_BRANCH=${HIGHFIVE_BRANCH:-"v2.x"} | |
| LIBSONATA_BRANCH=${LIBSONATA_BRANCH:-"master"} | |
| git clone https://github.com/BlueBrain/libsonata.git \ | |
| --branch ${LIBSONATA_BRANCH} --recursive | |
| cd libsonata | |
| pushd extlib/HighFive | |
| git fetch && git checkout origin/${HIGHFIVE_BRANCH} | |
| popd | |
| CMAKE_OPTIONS=(-DCMAKE_BUILD_TYPE=$BUILD_TYPE \ | |
| -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR \ | |
| -DEXTLIB_FROM_SUBMODULES:BOOL=True) | |
| source $GITHUB_WORKSPACE/ci/build.sh | |
| cd build && ctest --output-on-failure | |
| - name: live debug session on failure | |
| if: failure() && contains(github.event.head_commit.message, 'live-debug-ci') | |
| uses: mxschmitt/action-tmate@v3 |