ntSynt v1.0.8

• ntSynt release v1.0.8
• Add support for multiple hash functions when generating common k-mer Bloom filter (--hashes)
• Add support for gzipped fasta files

ntSynt v1.0.7

• ntSynt release v1.0.7
• Fixes bug that led some python scripts to be missing from installation

ntSynt v1.0.6

• ntSynt release v1.0.6
• Add script ntsynt_merge_collinear.py - can be used to perform additional merging of collinear synteny blocks from the synteny blocks TSV file
• Documentation updates

ntSynt v1.0.5

• ntSynt release v1.0.5
• Added compatibility for python-igraph v1.0.0+
  • Backwards compatibility for older python-igraph versions is also maintained
• Documentation updates

ntSynt v1.0.4

• ntSynt release v1.0.4
• Fixed built tarball to include ntJoin subproject
• Small update to help page

ntSynt v1.0.3

• ntSynt release v1.0.3
• Retain snakemake metadata files
• Updates to documentation

ntSynt v1.0.2

• ntSynt release v1.0.2
• Fix to ntSynt python file to avoid SyntaxWarning with python 3.12 (#48)
• Update to snakemake driver file for snakemake version 8.17.0 to avoid config error (#50)
• Adjustments to ribbon border line weight and colour palette for ribbon plots R script (#44)

ntSynt v1.0.1

• ntSynt release v1.0.1
• Add --fastas_list argument to ntSynt to allow listing input genomes in a file, vs. on the command-line
• Add coverage of minimum genome size to denovo_synteny_block_stats.py analysis script
• Fixes for visualization scripts
• Documentation updates

ntSynt v1.0.0

Initial release of ntSynt: Multi-genome synteny detection using minimizer graph mappings