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changed siteMeasument unit as catetory now.
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hswerdfe committed Mar 15, 2021
1 parent 18d5725 commit f74a25a
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415 changes: 213 additions & 202 deletions img/ERD.svg
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36 changes: 26 additions & 10 deletions metadata_en.md
Original file line number Diff line number Diff line change
Expand Up @@ -196,7 +196,7 @@ Measurement result (ie. single variable) from a wastewater sample. WWMeaasure in
- `ph`: pH units
- `uScm`: Micro-siemens per centimeter.
- `detected`: Gene copies or variant detected in the sampleGene or variant copiesDetected = 1Gene or variant copiesNot detected = 0.
- `porpVar`: Proportion of variant in sample
- `propVar`: Proportion of variant in sample
- `pp`: Percent positive, for Moore swab.
- `pps`: Percent primary sludge, for total solids.
- `c`: temperature in celsius
Expand Down Expand Up @@ -225,7 +225,7 @@ Measurement result (ie. single variable) from a wastewater sample. WWMeaasure in
- **index**:(Index): [integer] Index number in case the measurement was taken multiple times.


- **value**:(Value): [float] The actual measurement value that was obtained through analysis.
- **value**:(Value): [float] The actual value that is being reported for this measurement. Use "NA" for missing values and make sure to leave a note.


- **qualityFlag**:(Quality flag): [boolean] Does the reporter suspect the measurement having some quality issues
Expand Down Expand Up @@ -270,6 +270,12 @@ The site of wastewater sampling, including several defaults that can be used to
- **description**:(Description): [string] Description of wastewater site (city, building, street, etc.) to better identify the location of the sampling point.


- **publicHealthDepartment**:(Public health department or region): [string] The public health department or region where the site or institute is located. See also `healthRegion` if there is a separate regional health care delivery authority.


- **healthRegion**:(Health planning region): [string] The health planning authority where is site or insititute is located. See also `publicHealthDepartment`


- **type**:(Type): [category] Type of site or institution where sample was taken.
- `airPln`: Airplane.
- `corFcil`: Correctional facility.
Expand Down Expand Up @@ -351,6 +357,9 @@ Measurement result (ie. single variable) obtained by at the site of wastewater s
- **reporterID**:(Reporter id): (Foreign key) [string] Links with the reporter that is responsible for the data.


- **sampleID**:(Sample id): (Foreign key) [string] Links with the identified Sample


- **dateTime**:(Date time): [date] The date and time the measurement was performed.


Expand All @@ -368,6 +377,10 @@ Measurement result (ie. single variable) obtained by at the site of wastewater s
- `wwNH4N`: Ammonium nitrogen concentration, as N.
- `wwTN`: Total nitrogen concentration, as N.
- `wwpH`: pH of the wastewater.
- `wwBOD5t`: 5 day total biochemical oxygen demand
- `wwBOD5c`: 5 day carbonaceous biochemical oxygen demand
- `wwPtot`: Total phosphates
- `wwPP`: Total phosphorous
- `wwCond`: Conductivity of the wastewater.

- **typeOther**:(Type other): [string] Description of the measurement in case it is not listed in type.
Expand All @@ -379,14 +392,11 @@ Measurement result (ie. single variable) obtained by at the site of wastewater s
- **aggregation**:(Aggregation): [category] When reporting an aggregate measurement, this field describes the method used.
- `single`: This value is not an aggregate measurement in any way (ie. not a mean, median, max or any other) and can be a replicate value.
- `mean`: Arithmetic mean
- `meanNr`: Arithmetic mean, normalized
- `geoMn`: Geometric mean
- `geoMnNr`: Geometric mean, normalized
- `median`: Median
- `min`: Lowest value in a range of values
- `max`: Highest value in a range of values
- `sd`: Standard deviation
- `sdNr`: Standard deviation, normalized
- `other`: Other aggregation method. Add description to aggregationOther

- **aggregationOther**:(Aggregation other): [string] Description for other type of aggregation not listed in aggregation.
Expand All @@ -395,11 +405,17 @@ Measurement result (ie. single variable) obtained by at the site of wastewater s
- **aggregationDesc**:(Aggregation desc): [string] Information on OR reference to which measurements that were included to calculate the aggregated measurement that is being reported.


- **value**:(Value): [float] The actual value that is being reported for this measurement.

- **value**:(Value): [float] The actual value that is being reported for this measurement. Use "NA" for missing values and make sure to leave a note.

- **unit**:(Unit): [string] The engineering unit of the measurement.

- **unit**:(Unit): [category] The engineering unit of the measurement.
- `c`: Degrees Celcius
- `mm`: Millimeters
- `m3H`: Cubic meters per hour
- `m3D`: Cubic meters per day
- `mgL`: Milligrams per liter
- `pH`: pH units
- `usCM`: Micro-siemens per centimeter

- **qualityFlag**:(Quality flag): [boolean] Does the reporter suspect quality issues with the value of this measurement

Expand Down Expand Up @@ -506,7 +522,7 @@ The assay method that was used to perform testing. Create a new record if there
- **aliasID**:(Alias id): [string] ID of an assay that is the same or similar. a comma separated list.


- **sampleSizeL**:(Sample size l): [float] Size of the sample that is analyzed in liters.
- **extractionVolMl**:(Extraction volume in ml): [float] Size of the sample that is analyzed in milliliters.


- **loq**:(Loq): [float] Limit of quantification (LOQ) for this method if one exists.
Expand Down Expand Up @@ -630,7 +646,7 @@ Covid-19 patient data for a specified polygon.
- `report`: Date that the numbers were reported publicly. Typically, reported data and this measure is most commonly reported and used.
- `test`: Date that the covid-19 test was performed.

- **value**:(Value): [float] The numeric value that is being reported.
- **value**:(Value): [float] The actual value that is being reported for this measurement. Use "NA" for missing values and make sure to leave a note.


- **notes**:(Notes): [string] Any additional notes.
Expand Down
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