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Fix issue 22

Fix issue 22 #199

Workflow file for this run

# This workflow will install Python dependencies, run tests and lint with a variety of Python versions
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions
name: Python package
on:
push:
branches: [ master ]
paths-ignore:
- 'article_data/**'
- 'docs/**'
- 'README.md'
- 'CHANGELOG.md'
- '.readthedocs.yml'
- 'recipes/**'
- 'tutorials/**'
- 'external_dependencies/**'
pull_request:
branches: [ master ]
paths-ignore:
- 'article_data/**'
- 'docs/**'
- 'README.md'
- 'CHANGELOG.md'
- '.readthedocs.yml'
- 'recipes/**'
- 'tutorials/**'
- 'external_dependencies/**'
jobs:
build:
strategy:
matrix:
platform: [ubuntu-latest, macos-latest, windows-latest]
python-version: [3.8, 3.9]
runs-on: ${{ matrix.platform }}
steps:
- uses: actions/checkout@v2
- name: Set up Python ${{ matrix.python-version }}
uses: actions/setup-python@v1
with:
python-version: ${{ matrix.python-version }}
- name: Install dependencies
run: |
python -m pip install --upgrade pip
pip install graphviz
pip install -r requirements.txt
#- name: Lint with flake8
#run: |
#pip install flake8
# stop the build if there are Python syntax errors or undefined names
#flake8 . --count --select=E9,F63,F7,F82 --show-source --statistics
# exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
#flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
- name: Prepare environment
run: |
python -m pip install --upgrade pip
pip install .
- name: Test with pytest
run: |
pip install pytest
cd test
pytest test_m2m_addedvalue.py
pytest test_m2m_analysis.py
pytest test_m2m_cscope.py
pytest test_m2m_iscope.py
pytest test_m2m_metacom.py
pytest test_m2m_mincom.py
pytest test_tiny_toy_metacom.py