Update limiric_calculation.R

AlicenJoyHenning · Aug 18, 2024 · 45389d1 · 45389d1
1 parent b4216df
commit 45389d1
Showing 1 changed file with 5 additions and 1 deletion.
diff --git a/R/limiric_calculation.R b/R/limiric_calculation.R
@@ -121,7 +121,11 @@ limiric_calculation <- function(organism,
 
   # Calculate complexity
   seurat_matrix <- Seurat::GetAssayData(limiric, layer = "data")
-  cat("problem\n")
+
+  cat("Dimensions of seurat_matrix:", dim(seurat_matrix), "\n")
+  cat("Structure of seurat_matrix:\n")
+  str(seurat_matrix)
+
   complexity_metric <- colSums(seurat_matrix > 0)
   limiric$complexity <- complexity_metric