Update README.md #23
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| name: R-CMD-check | |
| on: [push, pull_request] | |
| jobs: | |
| R-CMD-check: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Checkout repository | |
| uses: actions/checkout@v2 | |
| - name: Set up R | |
| uses: r-lib/actions/setup-r@v2 | |
| - name: Install system dependencies | |
| run: | | |
| sudo apt-get install -y libmagick++-dev | |
| - name: Check internet connection | |
| run: | | |
| ping -c 3 cran.r-project.org | |
| - name: Install R package dependencies | |
| run: | | |
| install.packages('devtools') | |
| install.packages('remotes') | |
| remotes::install_deps(dependencies = TRUE) | |
| shell: Rscript {0} | |
| - name: Retry installing devtools if failed | |
| if: failure() | |
| run: | | |
| install.packages('devtools') | |
| shell: Rscript {0} | |
| - name: Install DropletQC from GitHub | |
| run: | | |
| devtools::install_github("powellgenomicslab/DropletQC") | |
| shell: Rscript {0} | |
| - name: Check package | |
| run: | | |
| R CMD check --no-manual --as-cran | |
| shell: Rscript {0} |