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Reuse previously downloaded files in download-data.sh #301

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merged 12 commits into from
Dec 3, 2019
Merged

Reuse previously downloaded files in download-data.sh #301

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556f2fa
:wrench: update download-data.sh for v11 release
yuankunzhu Nov 26, 2019
e4c7922
:wrench: update release-notes.md for v11 release
yuankunzhu Nov 26, 2019
07007fb
update release-notes; replace consensus zip
yuankunzhu Nov 26, 2019
20a1caa
change consensus MAF to gzipped
yuankunzhu Nov 26, 2019
112019e
Remove unzip step
jaclyn-taroni Nov 27, 2019
43f8b6b
Check unchanged files in previous release and don't download again
jashapiro Dec 1, 2019
d45e0c9
Don't hard link over existing files
jashapiro Dec 1, 2019
d7ddcac
Hide a warning
jashapiro Dec 1, 2019
312985a
Remove --ignore-missing
jashapiro Dec 2, 2019
37c66e0
Move old symlink deletion back to start
jashapiro Dec 2, 2019
a493ca7
Merge remote-tracking branch 'upstream/master' into jashapiro/downloa…
jashapiro Dec 2, 2019
20e1c42
Merge branch 'master' into jashapiro/download-faster
jaclyn-taroni Dec 2, 2019
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Remove unzip step
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@jaclyn-taroni
jaclyn-taroni committed Nov 27, 2019
commit 112019eb01065459d47ef7ba615adef4cf58cd6c
3 changes: 0 additions & 3 deletions download-data.sh
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Original file line number Diff line number Diff line change
Expand Up @@ -47,6 +47,3 @@ for file in "${FILES[@]}"
do
ln -sfn $RELEASE/$file data/$file
done

# Unzip any zip files in the data directory using the update flag
unzip -u -d data data/*.zip